RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 CCR3P51677 355 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 CDK17Q00537 523 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 FMO1Q01740 532 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 KDSRQ06136 332 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 PPP2R5DQ14738 602 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 NAA30Q147X3 362 aaPredicted RBP12.57□□□□□ -0.4
HMGB2-201ENST00000296503 PREPLQ4J6C6 727 aaPredicted RBP12.57□□□□□ -0.4
HMGB2-201ENST00000296503 C2CD6Q53TS8 623 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 NUDT18Q6ZVK8 323 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 CCDC26Q8TAB7 109 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 FAM86C1Q9NVL1 165 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 IFNKQ9P0W0 207 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 MUC6Q6W4X9 2439 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 SYNJ2BP-COX16A0A087WUM0 186 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 TSPAN3O60637 253 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 KAT7O95251 611 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 TRUB2O95900 331 aaKnown RBP12.57□□□□□ -0.4
HMGB2-201ENST00000296503 SP9P0CG40 484 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 GBP1P32455 592 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 GRIA2P42262 883 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 GABRB2P47870 512 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 SLC11A2P49281 568 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 SEC13P55735 322 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 NOMO3P69849 1222 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 NHLH1Q02575 133 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 ELF2Q15723 593 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 NUGGCQ68CJ6 796 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 TSSK4Q6SA08 328 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 TRIM72Q6ZMU5 477 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 MAMSTRQ6ZN01 415 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 DDI1Q8WTU0 396 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 RNF34Q969K3 372 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 FAM122AQ96E09 287 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 AGPAT1Q99943 283 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 DNAJC17Q9NVM6 304 aaKnown RBP12.57□□□□□ -0.4
HMGB2-201ENST00000296503 MARK1Q9P0L2 795 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 COX16Q9P0S2 106 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 FBXO4Q9UKT5 387 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 MYO6Q9UM54 1294 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 TLR6Q9Y2C9 796 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 GOLGA8SH3BPF8 625 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 K7EQS6 105 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 CYP1A1P04798 512 aaPredicted RBP12.56□□□□□ -0.4
HMGB2-201ENST00000296503 NOS2P35228 1153 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 SATB1Q01826 763 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 RING1Q06587 406 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 C2orf27AQ580R0 203 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 ADGRF1Q5T601 910 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 FAM102AQ5T9C2 384 aaPredicted RBP12.56□□□□□ -0.4
HMGB2-201ENST00000296503 GRAMD4Q6IC98 578 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 OLFML1Q6UWY5 402 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 SLC26A9Q7LBE3 791 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 TAC4Q86UU9 113 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 XYLT1Q86Y38 959 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 MAML2Q8IZL2 1156 aaPredicted RBP12.56□□□□□ -0.4
HMGB2-201ENST00000296503 CPXM2Q8N436 756 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 RPLP0P6Q8NHW5 317 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 SLC30A5Q8TAD4 765 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 BAP1Q92560 729 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 EZH1Q92800 747 aaPredicted RBP12.56□□□□□ -0.4
HMGB2-201ENST00000296503 TMA16Q96EY4 203 aaKnown RBP12.56□□□□□ -0.4
HMGB2-201ENST00000296503 SLC2A13Q96QE2 648 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 NUP58Q9BVL2 599 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 FAM204AQ9H8W3 233 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 SLC12A6Q9UHW9 1150 aa12.56□□□□□ -0.4
HMGB2-201ENST00000296503 LRRC53A6NM62 1247 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 TRIM24O15164 1050 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 ACSL4O60488 711 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 LATS1O95835 1130 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 MOCS2O96007 188 aaPredicted RBP12.55□□□□□ -0.4
HMGB2-201ENST00000296503 APOEP02649 317 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 TNFAIP3P21580 790 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 TNFRSF4P43489 277 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 PITX1P78337 314 aaPredicted RBP12.55□□□□□ -0.4
HMGB2-201ENST00000296503 MESP2Q0VG99 397 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 NNTQ13423 1086 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 ASIC2Q16515 512 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 MPPE1Q53F39 396 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 ZC3H12AQ5D1E8 599 aaKnown RBP12.55□□□□□ -0.4
HMGB2-201ENST00000296503 SFMBT2Q5VUG0 894 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 PKN3Q6P5Z2 889 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 IRF2BP2Q7Z5L9 587 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 PHLDB2Q86SQ0 1253 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 ETFBKMTQ8IXQ9 262 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 CPLX3Q8WVH0 158 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 AZIN2Q96A70 460 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 PCDHB18PQ96TA0 734 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 DDX50Q9BQ39 737 aaKnown RBP12.55□□□□□ -0.4
HMGB2-201ENST00000296503 EDEM3Q9BZQ6 932 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.55□□□□□ -0.4
HMGB2-201ENST00000296503 DDIT4Q9NX09 232 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.43e-9■■□□□ 12.1
HMGB2-201ENST00000296503 SLC8A2Q9UPR5 921 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.55□□□□□ -0.41e-25■■■■■ 32.6
HMGB2-201ENST00000296503 A0A0A0MRY4 1105 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 GOLGA6L7A0A1B0GV03 622 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 IRAK2O43187 625 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 CACNG3O60359 315 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 DAB1O75553 588 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms