RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 C2CD2Q9Y426 696 aa6.37□□□□□ -1.39
VCAM1-201ENST00000294728 RIPK3Q9Y572 518 aa6.37□□□□□ -1.39
VCAM1-201ENST00000294728 ALPK3Q96L96 1907 aa6.37□□□□□ -1.39
VCAM1-201ENST00000294728 FAM237BA0A1B0GVD1 139 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 SPDYE5A6NIY4 337 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ZNF195O14628 629 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 MICAL2O94851 1124 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 SERPINE1P05121 402 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 HADHAP40939 763 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 POLD2P49005 469 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ADCY1Q08828 1119 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 THOC5Q13769 683 aaKnown RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 HERC3Q15034 1050 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 TAF1CQ15572 869 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ZYXQ15942 572 aaKnown RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 EFHC1Q5JVL4 640 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 LMBRD2Q68DH5 695 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 SNRNP48Q6IEG0 339 aaKnown RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 BORAQ6PGQ7 559 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 UNC5AQ6ZN44 842 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 DHDDSQ86SQ9 333 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 KLHDC8BQ8IXV7 354 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CATSPER1Q8NEC5 780 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 TMEM143Q96AN5 459 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ATG4CQ96DT6 458 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 FGD4Q96M96 766 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 PEBP4Q96S96 227 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 SH2D3AQ9BRG2 576 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 FAM167BQ9BTA0 163 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 HTATIP2Q9BUP3 242 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ELP3Q9H9T3 547 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 METTL5Q9NRN9 209 aaKnown RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 DLGAP2Q9P1A6 1054 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CPSF2Q9P2I0 782 aaKnown RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 BARX2Q9UMQ3 279 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 E5RJQ4 531 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 PRKCBP05771 671 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 FAM163BP0C2L3 166 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 GNAT1P11488 350 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 DNAJB2P25686 324 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 BASP1P80723 227 aaKnown RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 SP2Q02086 613 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 LAMTOR4Q0VGL1 99 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 MTMR2Q13614 643 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 HIC1Q14526 733 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 TMEM132BQ14DG7 1078 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 LLGL1Q15334 1064 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ARHGAP17Q68EM7 881 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 TRIM68Q6AZZ1 485 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 LRRC8BQ6P9F7 803 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CDHR3Q6ZTQ4 885 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 SETD3Q86TU7 594 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 KIRREL3Q8IZU9 778 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 MARVELD2Q8N4S9 558 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 RDH11Q8TC12 318 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 SEPT1Q8WYJ6 367 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 LZICQ8WZA0 190 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ATP2A3Q93084 1043 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 SPATA16Q9BXB7 569 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 PCDH18Q9HCL0 1135 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 PRMT7Q9NVM4 692 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 BCAP29Q9UHQ4 241 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 SIX4Q9UIU6 781 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CITO14578 2027 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 COL1A2P08123 1366 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CCL15-CCL14A0A0B4J2E2 113 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ZBTB42B2RXF5 422 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 PRPSAP2O60256 369 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 BANF1O75531 89 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 DGKIO75912 1065 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 GJB1P08034 283 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CD48P09326 243 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 FGF3P11487 239 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 UQCRBP14927 111 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 BMP8BP34820 402 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 GJC1P36383 396 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 PSMD8P48556 350 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 TUBP50607 506 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 STAT5BP51692 787 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 AIF1P55008 147 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 YWHAGP61981 247 aaKnown RBP eCLIP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 TMPRSS15P98073 1019 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 OVGP1Q12889 678 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CDC16Q13042 620 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 RFTN1Q14699 578 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CCL15Q16663 113 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 LIN52Q52LA3 116 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 TEDDM1Q5T9Z0 273 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 OGFRL1Q5TC84 451 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CYP4A22Q5TCH4 519 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 FOXB2Q5VYV0 432 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ZFP1Q6P2D0 407 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 C17orf99Q6UX52 265 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 BNIPLQ7Z465 357 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 PRPF39Q86UA1 669 aaKnown RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 KBTBD6Q86V97 674 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 KBTBD2Q8IY47 623 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ADGRF2Q8IZF7 708 aa6.36□□□□□ -1.39
VCAM1-201ENST00000294728 ST13P4Q8IZP2 240 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-201ENST00000294728 CPSF7Q8N684 471 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms