RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 SERPINB3P29508 390 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 SLC8A1P32418 973 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 MLH1P40692 756 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 ETV4P43268 484 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 ARFIP2P53365 341 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 TMPRSS15P98073 1019 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 KCNV2Q8TDN2 545 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 FBXO41Q8TF61 875 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 RNF139Q8WU17 664 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 EBNA1BP2Q99848 306 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 C11orf84Q9BUA3 381 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 TMEM120AQ9BXJ8 343 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 FAM237BA0A1B0GVD1 139 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 MBLAC1A4D2B0 266 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 C1QAP02745 245 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 T-ENOLP0DO92 83 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 PTPN1P18031 435 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 MGAT1P26572 445 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 PSMB4P28070 264 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 GMPRP36959 345 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 TKTL1P51854 596 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 CCDC15Q0P6D6 951 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 EFHC1Q5JVL4 640 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 GSDMBQ8TAX9 411 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 CENPIQ92674 756 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 ATXN7L3BQ96GX2 97 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 RHOBTB2Q9BYZ6 727 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 AP5M1Q9H0R1 490 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 PTGESO14684 152 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 NRP1O14786 923 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 GCATO75600 419 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 TSHRP16473 764 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 ZFXP17010 805 aaPredicted RBP16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 NPR3P17342 541 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 ACADSBP45954 432 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 DEUP1Q05D60 604 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 SLC25A52Q3SY17 297 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 KIAA0319Q5VV43 1072 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 TTC7BQ86TV6 843 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 LONP2Q86WA8 852 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 P2RY11Q96G91 374 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 GAD1Q99259 594 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 CYLDQ9NQC7 956 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 PIGVQ9NUD9 493 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 DDX43Q9NXZ2 648 aaKnown RBP16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 ARMCX1Q9P291 453 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 FZD10Q9ULW2 581 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 FAM72CH0Y354 149 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 XPO1O14980 1071 aaKnown RBP16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 MYL2P10916 166 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 MRPS5P82675 430 aaKnown RBP16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 SLC18A2Q05940 514 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 CHI3L2Q15782 390 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 LGSNQ5TDP6 509 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 FAM72AQ5TYM5 149 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 FAM72DQ6L9T8 149 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 C16orf46Q6P387 395 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 SH2D5Q6ZV89 423 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 CLNKQ7Z7G1 428 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 FAM72BQ86X60 149 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 KIRREL3Q8IZU9 778 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 EDEM1Q92611 657 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 PGBD4Q96DM1 585 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 TBC1D10AQ9BXI6 508 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 DUSP16Q9BY84 665 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 ULBP1Q9BZM6 244 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 PRDM12Q9H4Q4 367 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 SNX10Q9Y5X0 201 aa16.3■□□□□ 0.2
NCKIPSD-201ENST00000294129 C17orf102A2RUQ5 167 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 CASTOR2A6NHX0 329 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 C2CD2LO14523 706 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 C6orf222P0C671 652 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 PNPLA4P41247 253 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 CLEC20AQ6ZU45 233 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 C2orf69Q8N8R5 385 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 USP6NLQ92738 828 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 HSFY1Q96LI6 401 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 FAM124BQ9H5Z6 455 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 GDAP2Q9NXN4 497 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 H0Y3Z8 333 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 RFPL1O75677 317 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 KRT38O76015 456 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 AMHP03971 560 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 USP17L7P0C7H9 530 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 NR2C2P49116 596 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 CDC42EP1Q00587 391 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 IFRD2Q12894 506 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 NBPF20Q3BBV1 942 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 PAQR9Q6ZVX9 377 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 PID1Q7Z2X4 250 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 RAB3IPQ96QF0 476 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 A0A0A0MRY4 1105 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 CCDC78A2IDD5 438 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 MYADML2A6NDP7 307 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 YJEFN3A6XGL0 299 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 E7ENQ6 273 aa16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 ZNF865P0CJ78 1059 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-201ENST00000294129 PRKCHP24723 683 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms