RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 CCDC185Q8N715 623 aa18.47■□□□□ 0.55
CCDC78-201ENST00000293889 SLC46A2Q9BY10 475 aa18.47■□□□□ 0.55
CCDC78-201ENST00000293889 ARFGAP3Q9NP61 516 aa18.47■□□□□ 0.55
CCDC78-201ENST00000293889 TLR6Q9Y2C9 796 aa18.47■□□□□ 0.55
CCDC78-201ENST00000293889 USP15Q9Y4E8 981 aaPredicted RBP18.47■□□□□ 0.55
CCDC78-201ENST00000293889 PCDHA3Q9Y5H8 950 aa18.47■□□□□ 0.55
CCDC78-201ENST00000293889 TCF20Q9UGU0 1960 aaKnown RBP18.47■□□□□ 0.55
CCDC78-201ENST00000293889 CCDC66A2RUB6 948 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 PSTPIP1O43586 416 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 CEBPBP17676 345 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 DDX6P26196 483 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCDC78-201ENST00000293889 TBX4P57082 545 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 ITIH3Q06033 890 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 NNTQ13423 1086 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 SMAD4Q13485 552 aaKnown RBP18.46■□□□□ 0.55
CCDC78-201ENST00000293889 SMTNL2Q2TAL5 461 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 ARHGAP15Q53QZ3 475 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 KCNT1Q5JUK3 1230 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 POLNQ7Z5Q5 900 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 ING5Q8WYH8 240 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 SUSD6Q92537 303 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 ALG3Q92685 438 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 RNF34Q969K3 372 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 ACSF2Q96CM8 615 aaPredicted RBP18.46■□□□□ 0.55
CCDC78-201ENST00000293889 SLC39A13Q96H72 371 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 FCRL2Q96LA5 508 aaPredicted RBP18.46■□□□□ 0.55
CCDC78-201ENST00000293889 KLF16Q9BXK1 252 aaPredicted RBP18.46■□□□□ 0.55
CCDC78-201ENST00000293889 WDCPQ9H6R7 721 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 ANLNQ9NQW6 1124 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 TMPRSS4Q9NRS4 437 aa18.46■□□□□ 0.55
CCDC78-201ENST00000293889 TRAV19A0A0A6YYK7 116 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 MAP2K7O14733 419 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 IGLV3-27P01718 113 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 HMBSP08397 361 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 KRT7P08729 469 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 RARAP10276 462 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 MBL2P11226 248 aaPredicted RBP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 PFKLP17858 780 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 KPNA1P52294 538 aaPredicted RBP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 BOLA3Q53S33 107 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 UBL4BQ8N7F7 174 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 FUT8Q9BYC5 575 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 TKTL2Q9H0I9 626 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 TASP1Q9H6P5 420 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 GKN1Q9NS71 199 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 HBS1LQ9Y450 684 aaKnown RBP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 SOBPA7XYQ1 873 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 I6L893 689 aaPredicted RBP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 CKMP06732 381 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 FSHRP23945 695 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 CCR1P32246 355 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 ADRA1BP35368 520 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 SLC7A9P82251 487 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 COG7P83436 770 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 PPP2R5DQ14738 602 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 BRMS1LQ5PSV4 323 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 ATAT1Q5SQI0 421 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 ERMARDQ5T6L9 678 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 PAPD7Q5XG87 772 aaKnown RBP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 PTCRAQ6ISU1 281 aaPredicted RBP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 CES5AQ6NT32 575 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 POTEHQ6S545 545 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 HSPH1Q92598 858 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 ZFRQ96KR1 1074 aaKnown RBP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 PSMB7Q99436 277 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 SNRNP25Q9BV90 132 aaKnown RBP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 MAGEB5Q9BZ81 275 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 ANKZF1Q9H8Y5 726 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 KLHL11Q9NVR0 708 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 TMEM51Q9NW97 253 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 GPATCH2LQ9NWQ4 482 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 SMPD4Q9NXE4 827 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 ARHGEF38Q9NXL2 777 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 FZD10Q9ULW2 581 aa18.45■□□□□ 0.54
CCDC78-201ENST00000293889 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC78-201ENST00000293889 KCNU1A8MYU2 1149 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 SASH3O75995 380 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 SLC34A2O95436 690 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 ZXDBP98169 803 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 RING1Q06587 406 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 CBX2Q14781 532 aaPredicted RBP18.44■□□□□ 0.54
CCDC78-201ENST00000293889 DCAF12L1Q5VU92 463 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 KATNAL2Q8IYT4 538 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 CMTM8Q8IZV2 173 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 TEKT4Q8WW24 435 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 ATXN2LQ8WWM7 1075 aaKnown RBP18.44■□□□□ 0.54
CCDC78-201ENST00000293889 NTAN1Q96AB6 310 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 ZSWIM3Q96MP5 696 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 SLITRK6Q9H5Y7 841 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 SNX12Q9UMY4 172 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 CPQQ9Y646 472 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 CLUHO75153 1309 aa18.44■□□□□ 0.54
CCDC78-201ENST00000293889 KCNK3O14649 394 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 SLC2A3P11169 496 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 IL9P15248 144 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 CXCR5P32302 372 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 RWDD2BP57060 319 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 CA9Q16790 459 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 ZFYVE27Q5T4F4 411 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms