RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 SLC6A17Q9H1V8 727 aa10.2□□□□□ -0.78
CCDC58-201ENST00000291458 NDST4Q9H3R1 872 aa10.2□□□□□ -0.78
CCDC58-201ENST00000291458 ABCC13Q9NSE7 274 aa10.2□□□□□ -0.78
CCDC58-201ENST00000291458 CACNA2D2Q9NY47 1150 aa10.2□□□□□ -0.78
CCDC58-201ENST00000291458 WDR35Q9P2L0 1181 aa10.2□□□□□ -0.78
CCDC58-201ENST00000291458 CYTH4Q9UIA0 394 aa10.2□□□□□ -0.78
CCDC58-201ENST00000291458 FHOD1Q9Y613 1164 aa10.2□□□□□ -0.78
CCDC58-201ENST00000291458 EP300Q09472 2414 aaPredicted RBP10.19□□□□□ -0.78
CCDC58-201ENST00000291458 GOLGA6L7A0A1B0GV03 622 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 CAPN9O14815 690 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 GRAP2O75791 330 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 FBXO21O94952 628 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 CYBBP04839 570 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 ERCC5P28715 1186 aaPredicted RBP10.19□□□□□ -0.78
CCDC58-201ENST00000291458 ID4P47928 161 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 HARS2P49590 506 aaKnown RBP10.19□□□□□ -0.78
CCDC58-201ENST00000291458 KLK7P49862 253 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 TBX4P57082 545 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 MRPS21P82921 87 aaKnown RBP10.19□□□□□ -0.78
CCDC58-201ENST00000291458 PDCLQ13371 301 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 CRY1Q16526 586 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 EOGTQ5NDL2 527 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 SASS6Q6UVJ0 657 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 CLEC17AQ6ZS10 378 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 ENOSF1Q7L5Y1 443 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 TAC4Q86UU9 113 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 FRMD1Q8N878 549 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 KIAA1958Q8N8K9 716 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 CCDC26Q8TAB7 109 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 DQX1Q8TE96 717 aaKnown RBP10.19□□□□□ -0.78
CCDC58-201ENST00000291458 ZNF606Q8WXB4 792 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 SORCS1Q8WY21 1168 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 RMDN1Q96DB5 314 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 CIPCQ9C0C6 399 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 VPS16Q9H269 839 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 ARRDC1-AS1Q9H2J1 176 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 PDCL3Q9H2J4 239 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 POLMQ9NP87 494 aaPredicted RBP10.19□□□□□ -0.78
CCDC58-201ENST00000291458 MARK1Q9P0L2 795 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 STIM2Q9P246 746 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 CLEC4EQ9ULY5 219 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 PCDHGC3Q9UN70 934 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 NAALADL1Q9UQQ1 740 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 ZNF510Q9Y2H8 683 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 ABCA7Q8IZY2 2146 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 NUP205Q92621 2012 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 CEP192Q8TEP8 1941 aa10.19□□□□□ -0.78
CCDC58-201ENST00000291458 ATXN2Q99700 1313 aaKnown RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 ALDH1A2O94788 518 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 CNR2P34972 360 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 CHKAP35790 457 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 GPD2P43304 727 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 TNFRSF4P43489 277 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 DHPSP49366 369 aaPredicted RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 PITX1P78337 314 aaPredicted RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 CREB5Q02930 508 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 DRAP1Q14919 205 aaPredicted RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 SF3A2Q15428 464 aaKnown RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 TAF5Q15542 800 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 TRIP4Q15650 581 aaPredicted RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 STX1AQ16623 288 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 GEN1Q17RS7 908 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 RSPO4Q2I0M5 234 aaPredicted RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 PREPLQ4J6C6 727 aaPredicted RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 TCP11X2Q5H9J9 407 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 FYB2Q5VWT5 728 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 OR6B2Q6IFH4 312 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 TCEAL6Q6IPX3 200 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 KIAA1211LQ6NV74 962 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 KIAA1324Q6UXG2 1013 aaKnown RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 CACNA2D4Q7Z3S7 1137 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 SLC47A2Q86VL8 602 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 CAMKK1Q8N5S9 505 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 DEFB119Q8N690 84 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 SHC3Q92529 594 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 TCEAL3Q969E4 200 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 HSFY1Q96LI6 401 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 PCMTD1Q96MG8 357 aaPredicted RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 SYNCQ9H7C4 482 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 FAM204AQ9H8W3 233 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 SEMA4GQ9NTN9 838 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 HCN2Q9UL51 889 aa10.18□□□□□ -0.78
CCDC58-201ENST00000291458 HBS1LQ9Y450 684 aaKnown RBP10.18□□□□□ -0.78
CCDC58-201ENST00000291458 GVINP1Q7Z2Y8 2422 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 MUC22E2RYF6 1773 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 GTPBP10A4D1E9 387 aaKnown RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 WASH3PC4AMC7 463 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 FOXN3O00409 490 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 PAPSS1O43252 624 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 TBL1XO60907 577 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 PENKP01210 267 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 ERBB2P04626 1255 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 RETP07949 1114 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 HOXD9P28356 352 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 NTSR1P30989 418 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 HOXA6P31267 233 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 SLC6A4P31645 630 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 GGCXP38435 758 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 ACADSBP45954 432 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms