RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 LRRTM3Q86VH5 581 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 WDR6Q9NNW5 1121 aaKnown RBP19.92■□□□□ 0.78
BRAF-201ENST00000288602 SLCO1B3Q9NPD5 702 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 ABCF3Q9NUQ8 709 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 DDIT4Q9NX09 232 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 WDR91A4D1P6 747 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 EEF2KO00418 725 aaKnown RBP19.92■□□□□ 0.78
BRAF-201ENST00000288602 FAAP100Q0VG06 881 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 IFRD2Q12894 506 aaPredicted RBP19.92■□□□□ 0.78
BRAF-201ENST00000288602 RASA2Q15283 850 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 RAB41Q5JT25 222 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 LVRNQ6Q4G3 990 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 RPAINQ86UA6 219 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 PPM1NQ8N819 430 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 SMARCD1Q96GM5 515 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.92■□□□□ 0.78
BRAF-201ENST00000288602 SENP1Q9P0U3 644 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 TTLL3Q9Y4R7 772 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 TDRD15B5MCY1 1934 aaKnown RBP19.91■□□□□ 0.78
BRAF-201ENST00000288602 H3BRJ5 948 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 UGT1A9O60656 530 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 OAS1P00973 400 aaKnown RBP19.91■□□□□ 0.78
BRAF-201ENST00000288602 LTFP02788 710 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 FAM163BP0C2L3 166 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 ODC1P11926 461 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 ADRA1BP35368 520 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 CRADDP78560 199 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 DSC3Q14574 896 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 ITIH4Q14624 930 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 RFX8Q6ZV50 586 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 PACS2Q86VP3 889 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 OR10T2Q8NGX3 314 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 P2RY11Q96G91 374 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 PPCSQ9HAB8 311 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 UGT1A7Q9HAW7 530 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 UGT1A10Q9HAW8 530 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 UGT1A8Q9HAW9 530 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 FETUBQ9UGM5 382 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 SMG5Q9UPR3 1016 aaKnown RBP19.91■□□□□ 0.78
BRAF-201ENST00000288602 USP15Q9Y4E8 981 aaPredicted RBP19.91■□□□□ 0.78
BRAF-201ENST00000288602 IKBKGQ9Y6K9 419 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 ZNF623O75123 536 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 INHBAP08476 426 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 ACTN3Q08043 901 aaPredicted RBP19.91■□□□□ 0.78
BRAF-201ENST00000288602 SPARCL1Q14515 664 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 BHLHA9Q7RTU4 235 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 COLGALT1Q8NBJ5 622 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 SERAC1Q96JX3 654 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 PRDM12Q9H4Q4 367 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 CNGB3Q9NQW8 809 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 SMYD2Q9NRG4 433 aa19.91■□□□□ 0.78
BRAF-201ENST00000288602 H0YHG0 523 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 C1QAP02745 245 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 ADRA1DP25100 572 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 PCSK1P29120 753 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 MAGEA6P43360 314 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 TRMT10BQ6PF06 316 aaKnown RBP19.9■□□□□ 0.78
BRAF-201ENST00000288602 SPATA21Q7Z572 469 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 PDCD7Q8N8D1 485 aaKnown RBP19.9■□□□□ 0.78
BRAF-201ENST00000288602 TCP10LQ8TDR4 215 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 SLC44A1Q8WWI5 657 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 PITPNM3Q9BZ71 974 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 ALG13Q9NP73 1137 aaKnown RBP19.9■□□□□ 0.78
BRAF-201ENST00000288602 SLC17A7Q9P2U7 560 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 KCNK1O00180 336 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 RNF103O00237 685 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 FBXO21O94952 628 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 FSBPO95073 299 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 SMAD1Q15797 465 aaKnown RBP19.9■□□□□ 0.78
BRAF-201ENST00000288602 FAM133BQ5BKY9 247 aaKnown RBP19.9■□□□□ 0.78
BRAF-201ENST00000288602 UNC5AQ6ZN44 842 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 SCAMP5Q8TAC9 235 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 SIGLEC10Q96LC7 697 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 PTCH2Q9Y6C5 1203 aa19.9■□□□□ 0.78
BRAF-201ENST00000288602 B4GALT3O60512 393 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 CPP00450 1065 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 ERCC2P18074 760 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 GBP2P32456 591 aaPredicted RBP19.89■□□□□ 0.77
BRAF-201ENST00000288602 SCTRP47872 440 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 NKX3-2P78367 333 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 OLIG2Q13516 323 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 DPYSQ14117 519 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 HHATQ5VTY9 493 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 BSPRYQ5W0U4 402 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 TRPM8Q7Z2W7 1104 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 RCOR3Q9P2K3 495 aaPredicted RBP19.89■□□□□ 0.77
BRAF-201ENST00000288602 MRPL42Q9Y6G3 142 aaKnown RBP19.89■□□□□ 0.77
BRAF-201ENST00000288602 TTC3P53804 2025 aa19.89■□□□□ 0.77
BRAF-201ENST00000288602 A0A0A0MRY4 1105 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 TSHRP16473 764 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 RAB27AP51159 221 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 INTS6LQ5JSJ4 861 aaKnown RBP19.88■□□□□ 0.77
BRAF-201ENST00000288602 METTL23Q86XA0 190 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 PSTKQ8IV42 348 aaKnown RBP19.88■□□□□ 0.77
BRAF-201ENST00000288602 UNC5BQ8IZJ1 945 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 PLCD3Q8N3E9 789 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 STKLD1Q8NE28 680 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 DEPDC1BQ8WUY9 529 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 RSPH1Q8WYR4 309 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 SPATA13Q96N96 652 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms