RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 GJA3Q9Y6H8 435 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 FKBP6O75344 327 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 ATXN1P54253 815 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 TMEM132DQ14C87 1099 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 SLC10A6Q3KNW5 377 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 EFHC1Q5JVL4 640 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 PPP1R26Q5T8A7 1209 aaPredicted RBP13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 DPY19L2Q6NUT2 758 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 KCNT2Q6UVM3 1135 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 C4orf22Q6V702 233 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 RSPH3Q86UC2 560 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 EXOC8Q8IYI6 725 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 USP6NLQ92738 828 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 NT5C1AQ9BXI3 368 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 TRIM4Q9C037 500 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 DHX35Q9H5Z1 703 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 S100A14Q9HCY8 104 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 SORCS3Q9UPU3 1222 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 APOBEC2Q9Y235 224 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 ZNF638Q14966 1978 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 PTPRFP10586 1907 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 SCN1AP35498 2009 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 MDM4O15151 490 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 LGR5O75473 907 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 SORBS2O94875 1100 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 RPS12P25398 132 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 L1CAMP32004 1257 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 EPHB1P54762 984 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 INHBEP58166 350 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 SLC6A3Q01959 620 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 PDE1CQ14123 709 aaPredicted RBP13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 RBBP5Q15291 538 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 ATG14Q6ZNE5 492 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 MAVSQ7Z434 540 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 KLRG1Q96E93 195 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 B3GNT5Q9BYG0 378 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 EBF3Q9H4W6 596 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 XPNPEP3Q9NQH7 507 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 FAM49BQ9NUQ9 324 aa13.65□□□□□ -0.22
SLC28A1-201ENST00000286749 PLIN3O60664 434 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 SIN3BO75182 1162 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 PDE5AO76074 875 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 YY1P25490 414 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 CNTFP26441 200 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 SEMA5AQ13591 1074 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 PCLAFQ15004 111 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 LRRC36Q1X8D7 754 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 PACS1Q6VY07 963 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 LBX2Q6XYB7 198 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 TTC30AQ86WT1 665 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 CLMNQ96JQ2 1002 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 QKIQ96PU8 341 aaKnown RBP eCLIP13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 SIKE1Q9BRV8 207 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 R3HDMLQ9H3Y0 253 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 PNPOQ9NVS9 261 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 MFHAS1Q9Y4C4 1052 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 PAPSS1O43252 624 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 RNASEH1O60930 286 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 GLRA3O75311 464 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 AP1G2O75843 785 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 KLHL2O95198 593 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 MCF2P10911 925 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 COPAP53621 1224 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 IGBP1P78318 339 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 HEATR6Q6AI08 1181 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 MARK2Q7KZI7 788 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 PLPPR4Q7Z2D5 763 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 DHDDSQ86SQ9 333 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 ACOT1Q86TX2 421 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 ZFAND2BQ8WV99 257 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 CCDC124Q96CT7 223 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 SPATA33Q96N06 139 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 GCOM2Q9BZD3 368 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 FAM192AQ9GZU8 254 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 PDZD7Q9H5P4 517 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 ASB7Q9H672 318 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 IFT122Q9HBG6 1241 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 CYP4F11Q9HBI6 524 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 PRMT7Q9NVM4 692 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 PSAT1Q9Y617 370 aa13.64□□□□□ -0.23
SLC28A1-201ENST00000286749 A6NJR5 290 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 GABBR2O75899 941 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 GMPRP36959 345 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 RAB27AP51159 221 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 SESN2P58004 480 aaPredicted RBP13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 NIPAL4Q0D2K0 466 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 CCNIQ14094 377 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 DBN1Q16643 649 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 CELF3Q5SZQ8 465 aaKnown RBP13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 STXBP5Q5T5C0 1151 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 VWA5B1Q5TIE3 1220 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 STEAP4Q687X5 459 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 AAGABQ6PD74 315 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 RNF111Q6ZNA4 994 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 RIOX2Q8IUF8 465 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 C10orf107Q8IVU9 208 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 SLC26A7Q8TE54 656 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 COPS5Q92905 334 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 PPP2R3CQ969Q6 453 aa13.63□□□□□ -0.23
SLC28A1-201ENST00000286749 SORT1Q99523 831 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms