RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GDAP2Q9NXN4 497 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 SLC17A7Q9P2U7 560 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 MGEA5O60502 916 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 SESN3P58005 492 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 HADHQ16836 314 aaKnown RBP18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 FNBP1LQ5T0N5 605 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 WSCD1Q658N2 575 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 VPS52Q8N1B4 723 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 KCTD6Q8NC69 237 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 C3orf58Q8NDZ4 430 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 NDRG1Q92597 394 aaKnown RBP18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 STX18Q9P2W9 335 aaKnown RBP18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 HUS1O60921 280 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 KRT7P08729 469 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 CLCNKBP51801 687 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 ATXN1P54253 815 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 SP3Q02447 781 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 ZBTB16Q05516 673 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 MGAT3Q09327 533 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 KPNB1Q14974 876 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 SCYL2Q6P3W7 929 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 LRRC74BQ6ZQY2 392 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 SMC1BQ8NDV3 1235 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 FBXO36Q8NEA4 188 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 TEKT4Q8WW24 435 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 TMEM120AQ9BXJ8 343 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 KCNK13Q9HB14 408 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 NGRNQ9NPE2 291 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 SCOCQ9UIL1 159 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 XPOTO43592 962 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 LPXNO60711 386 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 GSTA2P09210 222 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 SERPINB3P29508 390 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 SCNN1GP51170 649 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 PRKD1Q15139 912 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 STILQ15468 1287 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 MSS51Q4VC12 460 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 THEMIS2Q5TEJ8 643 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 ANKRD22Q5VYY1 191 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 AP1ARQ63HQ0 302 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 TMEM110Q86TL2 294 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 RSPH3Q86UC2 560 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 PALM2Q8IXS6 379 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 ARHGAP24Q8N264 748 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 TTC13Q8NBP0 860 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 ACTL9Q8TC94 416 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 NRG4Q8WWG1 115 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 SCG3Q8WXD2 468 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 PTPRN2Q92932 1015 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 STMN2Q93045 179 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 MAGEB5Q9BZ81 275 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 TSPYL2Q9H2G4 693 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 ASNSD1Q9NWL6 643 aa18.93■□□□□ 0.62
PDLIM3-201ENST00000284767 IQANK1A0A1B0GTG1 560 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 CYB561D2O14569 222 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 CAPN9O14815 690 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 KRT36O76013 467 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 BEST1O76090 585 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 MT-ND3P03897 115 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 PAPOLAP51003 745 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 NRLP54845 237 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 OTUD4Q01804 1114 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 SLC6A3Q01959 620 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 AP1B1Q10567 949 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 SV2CQ496J9 727 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 KIAA0319Q5VV43 1072 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 CCSAPQ6IQ19 270 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 AGMOQ6ZNB7 445 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 LRRC6Q86X45 466 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 MFN1Q8IWA4 741 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 CRYBG2Q8N1P7 616 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 TAB3Q8N5C8 712 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 PPFIBP2Q8ND30 876 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 CNPY3Q9BT09 278 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 FAM124BQ9H5Z6 455 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 PAPOLBQ9NRJ5 636 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 DLGAP2Q9P1A6 1054 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 ZNF212Q9UDV6 495 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 PADI3Q9ULW8 664 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 CASTOR2A6NHX0 329 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 TRPA1O75762 1119 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 UPP2O95045 317 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 DLDP09622 509 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 ESRRAP11474 423 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 PNPLA4P41247 253 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 ETV4P43268 484 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 NEK3P51956 506 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 RBBP5Q15291 538 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 PAN2Q504Q3 1202 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 ARHGAP17Q68EM7 881 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 SMYD5Q6GMV2 418 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 KLHDC9Q8NEP7 349 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 APOPT1Q96IL0 206 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 CYTH2Q99418 400 aa18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 WDR83Q9BRX9 315 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-201ENST00000284767 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 ARL5CA6NH57 179 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms