RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CD248Q9HCU0 757 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ATP10BO94823 1461 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 POLRMTO00411 1230 aaKnown RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 KCNQ3O43525 872 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PRMT3O60678 531 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 OVGP1Q12889 678 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 STRIP1Q5VSL9 837 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 AMER2Q8N7J2 671 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 RFT1Q96AA3 541 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 MKNK1Q9BUB5 465 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ANTXR1Q9H6X2 564 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 EVA1BQ9NVM1 165 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 DDIT4Q9NX09 232 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 MGAT4AQ9UM21 535 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 GSAPA4D1B5 854 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 RBMXL2O75526 392 aaKnown RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 SCGNO76038 276 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PTPN3P26045 913 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 EPHB2P29323 1055 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 RPL9P32969 192 aaKnown RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 GLRBP48167 497 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 FRG1Q14331 258 aaKnown RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 RUNDC3AQ59EK9 446 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 WASHC2DQ5SRD0 308 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PDPK2PQ6A1A2 396 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 IFNLR1Q8IU57 520 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 SPPL2AQ8TCT8 520 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ZNF668Q96K58 619 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PAFAH2Q99487 392 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 C1QTNF7Q9BXJ2 289 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CAB39LQ9H9S4 337 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 VANGL2Q9ULK5 521 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 F9P00740 461 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CPT1AP50416 773 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 BNC1Q01954 994 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 TOB2Q14106 344 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ALX1Q15699 326 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CLEC4GQ6UXB4 293 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ZNF655Q8N720 491 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 OR7A2PQ8NGA2 310 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 MCOLN3Q8TDD5 553 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ZNF184Q99676 751 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CHID1Q9BWS9 393 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 DPY30Q9C005 99 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ELL3Q9HB65 397 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PIM2Q9P1W9 311 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 HEG1Q9ULI3 1381 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 RPLP2P05387 115 aaKnown RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PRG2P13727 222 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 TNNI3P19429 210 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ADARP55265 1226 aaKnown RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 RAB25P57735 213 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PRKCEQ02156 737 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 C5orf22Q49AR2 442 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 EPS8L3Q8TE67 593 aaKnown RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CAPSLQ8WWF8 208 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ZIM3Q96PE6 472 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 SEPHS2Q99611 448 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ACOT9Q9Y305 439 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 NPHP3-ACAD11A0A0J9YXS1 232 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 AHCYL1O43865 530 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 FAUP35544 74 aaKnown RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CBX5P45973 191 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ACOT2P49753 483 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 VBP1P61758 197 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 TOP3AQ13472 1001 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 GALNT3Q14435 633 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 SLC29A2Q14542 456 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PYDC2Q56P42 97 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 MYCBPAPQ8TBZ2 947 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CCSER1Q9C0I3 900 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 DNAJC16Q9Y2G8 782 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CTSHP09668 335 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 NMT1P30419 496 aaKnown RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CYP20A1Q6UW02 462 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 FAM20CQ8IXL6 584 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 OTUD5Q96G74 571 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 TBCDQ9BTW9 1192 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PRKD2Q9BZL6 878 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 LRRC4BQ9NT99 713 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ASAP1Q9ULH1 1129 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 MAGEB16A2A368 324 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 PSIP1O75475 530 aaKnown RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ACADMP11310 421 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 OR2W6PQ8NHA6 318 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ITFG1Q8TB96 612 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 FBXO32Q969P5 355 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 RPS6KA6Q9UK32 745 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 MDM4O15151 490 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ITGADQ13349 1161 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 FNIP1Q8TF40 1166 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 TMEM159Q96B96 161 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ACOX2Q99424 681 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 REEP2Q9BRK0 252 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 SLC2A4P14672 509 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ARF4P18085 180 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 TAF6P49848 677 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ABATP80404 500 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms