RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 PRSS55Q6UWB4 352 aaPredicted RBP22.83■■□□□ 1.25
CCDC7-201ENST00000277657 BZW1Q7L1Q6 419 aaKnown RBP22.83■■□□□ 1.25
CCDC7-201ENST00000277657 NECAB2Q7Z6G3 386 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 NAT8LQ8N9F0 302 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 SPATA17Q96L03 361 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 QKIQ96PU8 341 aaKnown RBP eCLIP22.83■■□□□ 1.251e-7■■■■■ 31.4
CCDC7-201ENST00000277657 CRISPLD1Q9H336 500 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 MTRRQ9UBK8 725 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 ADAM21Q9UKJ8 722 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 GOLGA6L10A6NI86 522 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 SMAPO00193 183 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 TTC4O95801 387 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 CAPN2P17655 700 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 LBX1P52954 281 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 SLC8B1Q6J4K2 584 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 ARHGAP18Q8N392 663 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 STKLD1Q8NE28 680 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 RBM15Q96T37 977 aaKnown RBP eCLIP22.83■■□□□ 1.24
CCDC7-201ENST00000277657 DNAJC17Q9NVM6 304 aaKnown RBP22.83■■□□□ 1.24
CCDC7-201ENST00000277657 OSER1Q9NX31 292 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 ARHGEF38Q9NXL2 777 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 BACE2Q9Y5Z0 518 aa22.83■■□□□ 1.24
CCDC7-201ENST00000277657 HACD1B0YJ81 288 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 HAPLN1P10915 354 aaPredicted RBP22.82■■□□□ 1.24
CCDC7-201ENST00000277657 DEFB103AP81534 67 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 IFFO1Q0D2I5 559 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 BRMS1LQ5PSV4 323 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 FBXO22Q8NEZ5 403 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 CASP10Q92851 521 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 ATP6V1G3Q96LB4 118 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 TMEM109Q9BVC6 243 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 PHACTR1Q9C0D0 580 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 PAK5Q9P286 719 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 SLC27A5Q9Y2P5 690 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 CDY1Q9Y6F8 540 aa22.82■■□□□ 1.24
CCDC7-201ENST00000277657 MFSD11O43934 449 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 EFCAB14O75071 495 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 ANKRD22Q5VYY1 191 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 MFSD5Q6N075 450 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 MSANTD2Q6P1R3 559 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 DENND5BQ6ZUT9 1274 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 OSBPL2Q9H1P3 480 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 LRRC4CQ9HCJ2 640 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 PRDM5Q9NQX1 630 aaPredicted RBP22.81■■□□□ 1.24
CCDC7-201ENST00000277657 TMEM51Q9NW97 253 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 NINJ2Q9NZG7 142 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 GREB1Q4ZG55 1949 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 HMGB1P1B2RPK0 211 aaPredicted RBP22.81■■□□□ 1.24
CCDC7-201ENST00000277657 RTN3O95197 1032 aaPredicted RBP22.81■■□□□ 1.24
CCDC7-201ENST00000277657 TPI1P60174 286 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 WDR5P61964 334 aaKnown RBP22.81■■□□□ 1.24
CCDC7-201ENST00000277657 TERF2Q15554 542 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 COMMD8Q9NX08 183 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 OR12D3Q9UGF7 316 aa22.81■■□□□ 1.24
CCDC7-201ENST00000277657 ADAM12O43184 909 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 SOAT2O75908 522 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 RAG1P15918 1043 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 ERCC2P18074 760 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 ACTN2P35609 894 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 MAGEA4P43358 317 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 DUSP4Q13115 394 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 KYNUQ16719 465 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 KRT71Q3SY84 523 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 MGAT5BQ3V5L5 792 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 C4orf22Q6V702 233 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 FAM76AQ8TAV0 307 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 RNF34Q969K3 372 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 SEPT5Q99719 369 aaPredicted RBP22.8■■□□□ 1.24
CCDC7-201ENST00000277657 EPAS1Q99814 870 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 GMIPQ9P107 970 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 SFMBT1Q9UHJ3 866 aa22.8■■□□□ 1.24
CCDC7-201ENST00000277657 WDR27A2RRH5 827 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 GCATO75600 419 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 ACSL3O95573 720 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 YWHAQP27348 245 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 PPP2R5DQ14738 602 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 PSMD5Q16401 504 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 KCTD16Q68DU8 428 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 TMCO2Q7Z6W1 182 aaPredicted RBP22.79■■□□□ 1.24
CCDC7-201ENST00000277657 SLC39A11Q8N1S5 342 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 TMEM199Q8N511 208 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 GPR152Q8TDT2 470 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 TFB1MQ8WVM0 346 aaKnown RBP22.79■■□□□ 1.24
CCDC7-201ENST00000277657 HAPLN3Q96S86 360 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 RAD54BQ9Y620 910 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 TCRBV7S3A2A0A539 114 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 C5orf60A6NFR6 353 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 TMEM63AO94886 807 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 CCR1P32246 355 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 RPL10AP62906 217 aaKnown RBP22.79■■□□□ 1.24
CCDC7-201ENST00000277657 KCNJ11Q14654 390 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 PRKD1Q15139 912 aaPredicted RBP22.79■■□□□ 1.24
CCDC7-201ENST00000277657 AGBL2Q5U5Z8 902 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 CMTR2Q8IYT2 770 aaKnown RBP22.79■■□□□ 1.24
CCDC7-201ENST00000277657 LRRN4Q8WUT4 740 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 ZNF558Q96NG5 402 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 SERPINB11Q96P15 392 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 SAYSD1Q9NPB0 183 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 CLIC5Q9NZA1 410 aa22.79■■□□□ 1.24
CCDC7-201ENST00000277657 ALOX15BO15296 676 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms