RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SIX2Q9NPC8 291 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 SEPT10Q9P0V9 454 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 CNTN3Q9P232 1028 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 POLHQ9Y253 713 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 CROCCQ5TZA2 2017 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 SDR42E2A6NKP2 422 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 FSCN2O14926 492 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 ZW10O43264 779 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 ZBTB7AO95365 584 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 SLC5A1P13866 664 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 PTPN1P18031 435 aaKnown RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 ITGAXP20702 1163 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 STAT1P42224 750 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 TECP42680 631 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 TROAPQ12815 778 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 MAPRE1Q15691 268 aaKnown RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 SNAP47Q5SQN1 464 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 FAM182BQ5T319 152 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 SMIM5Q71RC9 77 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 ZCCHC9Q8N567 271 aaKnown RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 SH3YL1Q96HL8 342 aaPredicted RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 FGFBP2Q9BYJ0 223 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 STMN3Q9NZ72 180 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 HDAC9Q9UKV0 1011 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 UGT2A1Q9Y4X1 527 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 CLDN25C9JDP6 229 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 LPXNO60711 386 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 KCNH1O95259 989 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 KRT3P12035 628 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 GPD2P43304 727 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 HADHBP55084 474 aaKnown RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 PEX6Q13608 980 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 FAM205BPQ63HN1 556 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 MZB1Q8WU39 189 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 FIG4Q92562 907 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 METTL2AQ96IZ6 378 aaKnown RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF597Q96LX8 424 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 STN1Q9H668 368 aaKnown RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 CNOT11Q9UKZ1 510 aaKnown RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 CICQ96RK0 1608 aaPredicted RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 COL5A3P25940 1745 aaPredicted RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 CNTNAP5Q8WYK1 1306 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 PCP4L1A6NKN8 68 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 GOLGA8JA6NMD2 632 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 KLF11O14901 512 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 AURKAO14965 403 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 BCL10O95999 233 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 CCNA2P20248 432 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 MAP4P27816 1152 aaKnown RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 MLLT3P42568 568 aaPredicted RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 MAPK10P53779 464 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 TAGLNQ01995 201 aaKnown RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 CES4AQ5XG92 561 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 CCBE1Q6UXH8 406 aaPredicted RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 PLEKHG7Q6ZR37 379 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 SLC5A5Q92911 643 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 SYT11Q9BT88 431 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 OSBPL11Q9BXB4 747 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 SP140LQ9H930 580 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 GIMAP4Q9NUV9 329 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 UBA2Q9UBT2 640 aaPredicted RBP9.48□□□□□ -0.89
PDGFC-201ENST00000274071 ARHGAP26Q9UNA1 814 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 SORCS3Q9UPU3 1222 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 DNM3Q9UQ16 869 aa9.48□□□□□ -0.89
PDGFC-201ENST00000274071 RTL9Q8NET4 1388 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 LOC100653049A0A140TA62 436 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 CCDC194A0A1B0GVG4 234 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 GSG1L2A8MUP6 293 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 LAD1O00515 517 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ASNA1O43681 348 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 SPAG6O75602 509 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ATRNO75882 1429 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 KRT34O76011 436 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 GH2P01242 217 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ITIH1P19827 911 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 BST1Q10588 318 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 MGAT5BQ3V5L5 792 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ERFEQ4G0M1 354 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 DALRD3Q5D0E6 543 aaKnown RBP9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ZCCHC8Q6NZY4 707 aaKnown RBP9.47□□□□□ -0.89
PDGFC-201ENST00000274071 PLPP6Q8IY26 295 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 LARGE2Q8N3Y3 721 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 TMEM102Q8N9M5 508 aaPredicted RBP9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ALKBH8Q96BT7 664 aaKnown RBP9.47□□□□□ -0.89
PDGFC-201ENST00000274071 TARS2Q9BW92 718 aaKnown RBP9.47□□□□□ -0.89
PDGFC-201ENST00000274071 OR2B2Q9GZK3 357 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 NYXQ9GZU5 481 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 TMEM206Q9H813 350 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 COQ10BQ9H8M1 238 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 C8orf4Q9NR00 106 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 KCNQ5Q9NR82 932 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 SEPT11Q9NVA2 429 aaKnown RBP9.47□□□□□ -0.89
PDGFC-201ENST00000274071 PARVAQ9NVD7 372 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ITGA11Q9UKX5 1188 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 PPME1Q9Y570 386 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 EP400Q96L91 3159 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 TCRBV5S4A2TA0A5A2 114 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 FAM25EA8MYX2 175 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms