RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 CFHR5Q9BXR6 569 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 C12orf65Q9H3J6 166 aaKnown RBP23.92■■□□□ 1.42
RAB40B-201ENST00000269347 CCDC134Q9H6E4 229 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 STARD7Q9NQZ5 370 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 PIH1D1Q9NWS0 290 aaKnown RBP23.92■■□□□ 1.42
RAB40B-201ENST00000269347 FBXW11Q9UKB1 542 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 CFAP69A5D8W1 941 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 MOXD2PA6NHM9 499 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 NBNO60934 754 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 MAGEA6P43360 314 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 DCLRE1AQ6PJP8 1040 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 PALM2Q8IXS6 379 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 COLGALT2Q8IYK4 626 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 SEC16BQ96JE7 1060 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 B3GALT6Q96L58 329 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 RASSF4Q9H2L5 321 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 TBC1D13Q9NVG8 400 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.92■■□□□ 1.422e-6■■■■□ 24.3
RAB40B-201ENST00000269347 PRG3Q9Y2Y8 225 aaPredicted RBP23.92■■□□□ 1.42
RAB40B-201ENST00000269347 MYO16Q9Y6X6 1858 aa23.92■■□□□ 1.42
RAB40B-201ENST00000269347 TOMM70O94826 608 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 NR2C2P49116 596 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 GPR15P49685 360 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 OLIG2Q13516 323 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 SLC24A5Q71RS6 500 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 PXYLP1Q8TE99 480 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 DEPDC1BQ8WUY9 529 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 HTR3CQ8WXA8 447 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 PGLYRP2Q96PD5 576 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 COLEC11Q9BWP8 271 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 PRDM12Q9H4Q4 367 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 SMYD2Q9NRG4 433 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 NUDT5Q9UKK9 219 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 EEF2KO00418 725 aaKnown RBP23.91■■□□□ 1.42
RAB40B-201ENST00000269347 FAM155BO75949 473 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 ERCC2P18074 760 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 GEMIN4P57678 1058 aaKnown RBP23.91■■□□□ 1.42
RAB40B-201ENST00000269347 FAM189BP81408 668 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 ANKRD20A2Q5SQ80 823 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 ANKRD20A1Q5TYW2 823 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 ANKRD20A3Q5VUR7 823 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 METTL23Q86XA0 190 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 P2RY11Q96G91 374 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 KLF6Q99612 283 aaPredicted RBP23.91■■□□□ 1.42
RAB40B-201ENST00000269347 TRABDQ9H4I3 376 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 SQORQ9Y6N5 450 aa23.91■■□□□ 1.42
RAB40B-201ENST00000269347 CXorf49A8MYA2 514 aaPredicted RBP23.9■■□□□ 1.42
RAB40B-201ENST00000269347 ZFXP17010 805 aaPredicted RBP23.9■■□□□ 1.42
RAB40B-201ENST00000269347 FOXN2P32314 431 aa23.9■■□□□ 1.42
RAB40B-201ENST00000269347 WASHC5Q12768 1159 aa23.9■■□□□ 1.42
RAB40B-201ENST00000269347 PRKD1Q15139 912 aaPredicted RBP23.9■■□□□ 1.42
RAB40B-201ENST00000269347 KBTBD12Q3ZCT8 623 aa23.9■■□□□ 1.42
RAB40B-201ENST00000269347 ARTNQ5T4W7 220 aa23.9■■□□□ 1.42
RAB40B-201ENST00000269347 PSTKQ8IV42 348 aaKnown RBP23.9■■□□□ 1.42
RAB40B-201ENST00000269347 SH3TC2Q8TF17 1288 aa23.9■■□□□ 1.42
RAB40B-201ENST00000269347 TFB1MQ8WVM0 346 aaKnown RBP23.9■■□□□ 1.42
RAB40B-201ENST00000269347 CFAP36Q96G28 342 aa23.9■■□□□ 1.42
RAB40B-201ENST00000269347 RCOR3Q9P2K3 495 aaPredicted RBP23.9■■□□□ 1.42
RAB40B-201ENST00000269347 TTLL3Q9Y4R7 772 aa23.9■■□□□ 1.42
RAB40B-201ENST00000269347 TNFRSF10BO14763 440 aa23.89■■□□□ 1.42
RAB40B-201ENST00000269347 MAGEA3P43357 314 aa23.89■■□□□ 1.42
RAB40B-201ENST00000269347 AP1B1Q10567 949 aa23.89■■□□□ 1.42
RAB40B-201ENST00000269347 HEATR6Q6AI08 1181 aaKnown RBP23.89■■□□□ 1.42
RAB40B-201ENST00000269347 ADGRD1Q6QNK2 874 aa23.89■■□□□ 1.42
RAB40B-201ENST00000269347 RIBC1Q8N443 379 aaPredicted RBP23.89■■□□□ 1.42
RAB40B-201ENST00000269347 DENND1AQ8TEH3 1009 aa23.89■■□□□ 1.42
RAB40B-201ENST00000269347 PGAP3Q96FM1 320 aaPredicted RBP23.89■■□□□ 1.42
RAB40B-201ENST00000269347 GORASP1Q9BQQ3 440 aa23.89■■□□□ 1.42
RAB40B-201ENST00000269347 DMAP1Q9NPF5 467 aaPredicted RBP23.89■■□□□ 1.42
RAB40B-201ENST00000269347 H3BRJ5 948 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 UGT1A9O60656 530 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 HOXD10P28358 340 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 ATP5DP30049 168 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 SCAPQ12770 1279 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 PAFAH1B3Q15102 231 aaKnown RBP23.89■■□□□ 1.41
RAB40B-201ENST00000269347 NOMO2Q5JPE7 1267 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 TTC9BQ8N6N2 239 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 DQX1Q8TE96 717 aaKnown RBP23.89■■□□□ 1.41
RAB40B-201ENST00000269347 ZNF296Q8WUU4 475 aaPredicted RBP23.89■■□□□ 1.41
RAB40B-201ENST00000269347 NTAN1Q96AB6 310 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 SIGLEC10Q96LC7 697 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 KLC2Q9H0B6 622 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 TKTL2Q9H0I9 626 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 UGT1A7Q9HAW7 530 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 UGT1A10Q9HAW8 530 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 UGT1A8Q9HAW9 530 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 PSMC3IPQ9P2W1 217 aaPredicted RBP23.89■■□□□ 1.41
RAB40B-201ENST00000269347 BPTFQ12830 3046 aa23.89■■□□□ 1.41
RAB40B-201ENST00000269347 TCP11X1B4DZS4 312 aa23.88■■□□□ 1.41
RAB40B-201ENST00000269347 NDC80O14777 642 aa23.88■■□□□ 1.41
RAB40B-201ENST00000269347 KRT15P19012 456 aa23.88■■□□□ 1.41
RAB40B-201ENST00000269347 RPA3P35244 121 aaPredicted RBP23.88■■□□□ 1.41
RAB40B-201ENST00000269347 OR1G1P47890 313 aa23.88■■□□□ 1.41
RAB40B-201ENST00000269347 CXCR3P49682 368 aa23.88■■□□□ 1.41
RAB40B-201ENST00000269347 SLC5A3P53794 718 aa23.88■■□□□ 1.41
RAB40B-201ENST00000269347 YWHAGP61981 247 aaKnown RBP eCLIP23.88■■□□□ 1.41
RAB40B-201ENST00000269347 YWHAHQ04917 246 aaPredicted RBP23.88■■□□□ 1.41
RAB40B-201ENST00000269347 SLC39A12Q504Y0 691 aa23.88■■□□□ 1.41
RAB40B-201ENST00000269347 GLB1LQ6UWU2 654 aa23.88■■□□□ 1.41
RAB40B-201ENST00000269347 CPLX4Q7Z7G2 160 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms