RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 PCDH9Q9HC56 1237 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 ANKHQ9HCJ1 492 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 CKLFQ9UBR5 152 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 PRPF19Q9UMS4 504 aaKnown RBP5.59□□□□□ -1.51
XRN1-201ENST00000264951 RGS10O43665 173 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 CPA3P15088 417 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 GPD1P21695 349 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 S100A2P29034 98 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 NRG3P56975 720 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 HUNKP57058 714 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 ZNF211Q13398 564 aaPredicted RBP5.59□□□□□ -1.51
XRN1-201ENST00000264951 PTPRNQ16849 979 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 IRAK1BP1Q5VVH5 260 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 POMGNT2Q8NAT1 580 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 OR56A4Q8NGH8 313 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 SLC30A5Q8TAD4 765 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 AGR3Q8TD06 166 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 UTP15Q8TED0 518 aaKnown RBP5.59□□□□□ -1.51
XRN1-201ENST00000264951 SDR42E1Q8WUS8 393 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 CKAP2Q8WWK9 683 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 OXNAD1Q96HP4 312 aaPredicted RBP5.59□□□□□ -1.51
XRN1-201ENST00000264951 APOPT1Q96IL0 206 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 TEFMQ96QE5 360 aaKnown RBP5.59□□□□□ -1.51
XRN1-201ENST00000264951 FAM213AQ9BRX8 229 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 XKR8Q9H6D3 395 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 GPATCH8Q9UKJ3 1502 aaKnown RBP5.59□□□□□ -1.51
XRN1-201ENST00000264951 POLR1DQ9Y2S0 133 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 PEX16Q9Y5Y5 336 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 LRRC14BA6NHZ5 514 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 RAD51CO43502 376 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 ATP4AP20648 1035 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 CENPAP49450 140 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 PKP1Q13835 747 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 TMEM132BQ14DG7 1078 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 PAGE2BQ5JRK9 111 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 SLC27A3Q5K4L6 730 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 LAYNQ6UX15 382 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 ZBTB33Q86T24 672 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 ATL1Q8WXF7 558 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 ZNF594Q96JF6 807 aaPredicted RBP5.59□□□□□ -1.52
XRN1-201ENST00000264951 GIN1Q9NXP7 522 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 MED11Q9P086 117 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 SSR3Q9UNL2 185 aa5.59□□□□□ -1.52
XRN1-201ENST00000264951 PRLP01236 227 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 HARS2P49590 506 aaKnown RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 ACCSLQ4AC99 568 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 FAM126BQ8IXS8 530 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 YAF2Q8IY57 180 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 LZTR1Q8N653 840 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 MAGEE2Q8TD90 523 aaPredicted RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 ERMAPQ96PL5 475 aaPredicted RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 NUDT5Q9UKK9 219 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 GIT1Q9Y2X7 761 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 SYNDIG1LA6NDD5 238 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 SFI1A8K8P3 1242 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 LOC110117498-PIK3R3F6TDL0 507 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 BNIP3LO60238 219 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 EGFRP00533 1210 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 ETS1P14921 441 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 NPR2P20594 1047 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 STOMP27105 288 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 CCNG1P51959 295 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 ACAP1Q15027 740 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 DCAF4L1Q3SXM0 396 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 VPS26BQ4G0F5 336 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 SNAP47Q5SQN1 464 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 ATP6V0D2Q8N8Y2 350 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 ITFG1Q8TB96 612 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 PIK3R3Q92569 461 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 FAM129BQ96TA1 746 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 PRMT7Q9NVM4 692 aaPredicted RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 CDH7Q9ULB5 785 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 PCDHGC5Q9Y5F6 944 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 NOS1APO75052 506 aaPredicted RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 TCN1P20061 433 aaPredicted RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 PTX3P26022 381 aaPredicted RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 PTPN3P26045 913 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 NMT1P30419 496 aaKnown RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 RBM34P42696 430 aaKnown RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 NEK3P51956 506 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 CBFBQ13951 182 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 SPATA2LQ8IUW3 424 aaPredicted RBP5.58□□□□□ -1.52
XRN1-201ENST00000264951 EEF2KMTQ96G04 330 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 FAM111AQ96PZ2 611 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 NUDT12Q9BQG2 462 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 GSDMCQ9BYG8 508 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 COA1Q9GZY4 146 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 LRMDAQ9H2I8 198 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 DPP7Q9UHL4 492 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 ALG6Q9Y672 507 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 SYNMO15061 1565 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 QSOX1O00391 747 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 KMOO15229 486 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 CHRM3P20309 590 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 TNFRSF8P28908 595 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 SULT1E1P49888 294 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 PTSQ03393 145 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 ZRANB3Q5FWF4 1079 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 GRTP1Q5TC63 336 aa5.58□□□□□ -1.52
XRN1-201ENST00000264951 ULK3Q6PHR2 472 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms