RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 PGLYRP2Q96PD5 576 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 STRA6Q9BX79 667 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 SLC17A6Q9P2U8 582 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 LGALS13Q9UHV8 139 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 GPX6P59796 221 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 BTKQ06187 659 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 FSCN1Q16658 493 aaKnown RBP20.41■□□□□ 0.86
CSPG5-201ENST00000264723 HABP4Q5JVS0 413 aaKnown RBP20.41■□□□□ 0.86
CSPG5-201ENST00000264723 ATPAF2Q8N5M1 289 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 FAM136AQ96C01 138 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 ANLNQ9NQW6 1124 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 ARHGEF3Q9NR81 526 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 MRPS35P82673 323 aaKnown RBP20.41■□□□□ 0.86
CSPG5-201ENST00000264723 TNS4Q8IZW8 715 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 SPDYE1Q8NFV5 336 aaPredicted RBP20.41■□□□□ 0.86
CSPG5-201ENST00000264723 IFT43Q96FT9 208 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 UBA6A0AVT1 1052 aaPredicted RBP20.41■□□□□ 0.86
CSPG5-201ENST00000264723 HNRNPCL1O60812 293 aaKnown RBP20.41■□□□□ 0.86
CSPG5-201ENST00000264723 TOP3BO95985 862 aaKnown RBP20.41■□□□□ 0.86
CSPG5-201ENST00000264723 MAP3K21Q5TCX8 1036 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 IQSEC1Q6DN90 963 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 RHBDF2Q6PJF5 856 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 LRRC74BQ6ZQY2 392 aa20.41■□□□□ 0.86
CSPG5-201ENST00000264723 ST13P4Q8IZP2 240 aaPredicted RBP20.41■□□□□ 0.86
CSPG5-201ENST00000264723 NAV1Q8NEY1 1877 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 TYW5A2RUC4 315 aaKnown RBP20.4■□□□□ 0.86
CSPG5-201ENST00000264723 CLDN5O00501 218 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 DCXO43602 365 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 RGS20O76081 388 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 USP1O94782 785 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 SMIM10L2AP0DMW4 78 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 SMIM10L2BP0DMW5 78 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 MSX2P35548 267 aaPredicted RBP20.4■□□□□ 0.86
CSPG5-201ENST00000264723 PDCD2Q16342 344 aaPredicted RBP20.4■□□□□ 0.86
CSPG5-201ENST00000264723 PPP1R26Q5T8A7 1209 aaPredicted RBP20.4■□□□□ 0.86
CSPG5-201ENST00000264723 TRMT10BQ6PF06 316 aaKnown RBP20.4■□□□□ 0.86
CSPG5-201ENST00000264723 SLC30A9Q6PML9 568 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 STKLD1Q8NE28 680 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 NKD2Q969F2 451 aaPredicted RBP20.4■□□□□ 0.86
CSPG5-201ENST00000264723 SYT15Q9BQS2 421 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 BCORQ6W2J9 1755 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 SDR42E2A6NKP2 422 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 PROCP04070 461 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 POLBP06746 335 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 ATP6V1B1P15313 513 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 COPAP53621 1224 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 NIFKQ9BYG3 293 aaKnown RBP20.4■□□□□ 0.86
CSPG5-201ENST00000264723 YWHAZP63104 245 aaKnown RBP20.4■□□□□ 0.86
CSPG5-201ENST00000264723 PDK2Q15119 407 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 DNAL1Q4LDG9 190 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 HSP90AA5PQ58FG0 334 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 XYLT1Q86Y38 959 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 UNC5BQ8IZJ1 945 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 DEFB107AQ8IZN7 70 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 RMDN1Q96DB5 314 aa20.4■□□□□ 0.86
CSPG5-201ENST00000264723 ZNF512Q96ME7 567 aaPredicted RBP20.4■□□□□ 0.86
CSPG5-201ENST00000264723 ECM29Q5VYK3 1845 aa20.39■□□□□ 0.86
CSPG5-201ENST00000264723 TGM2P21980 687 aa20.39■□□□□ 0.86
CSPG5-201ENST00000264723 FSCBQ5H9T9 825 aa20.39■□□□□ 0.86
CSPG5-201ENST00000264723 TRIM67Q6ZTA4 783 aa20.39■□□□□ 0.86
CSPG5-201ENST00000264723 GMNNO75496 209 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 GRIA1P42261 906 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 SERPINB9P50453 376 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 NUDT2P50583 147 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 ZNF143P52747 638 aaPredicted RBP20.39■□□□□ 0.85
CSPG5-201ENST00000264723 SLC6A3Q01959 620 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 SLC34A1Q06495 639 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 CYTH1Q15438 398 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 RAB6CQ53S08 254 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 STRA8Q7Z7C7 330 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 INPP5DQ92835 1189 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 HAPLN2Q9GZV7 340 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 RAB6CQ9H0N0 254 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 MINDY3Q9H8M7 445 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 PRR5-ARHGAP8B1AHC4 643 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 ARHGAP8P85298 464 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 OCRLQ01968 901 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 PEX6Q13608 980 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 WASHC2DQ5SRD0 308 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 PTPRN2Q92932 1015 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 C12orf42Q96LP6 360 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 TUBGCP4Q9UGJ1 667 aa20.39■□□□□ 0.85
CSPG5-201ENST00000264723 RALBP11234 206 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 SCNN1GP51170 649 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 KLF1Q13351 362 aaPredicted RBP20.38■□□□□ 0.85
CSPG5-201ENST00000264723 MED21Q13503 144 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 RIPK1Q13546 671 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 THEMIS2Q5TEJ8 643 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 ZFP42Q96MM3 310 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 MRPL45Q9BRJ2 306 aaKnown RBP20.38■□□□□ 0.85
CSPG5-201ENST00000264723 LRMDAQ9H2I8 198 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 ATXN3LQ9H3M9 355 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 TAGLN3Q9UI15 199 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 PSMG1O95456 288 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 ATP4AP20648 1035 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 CACNA2D1P54289 1103 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 IGDCC3Q8IVU1 814 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 MYO9BQ13459 2157 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 USP17L7P0C7H9 530 aa20.38■□□□□ 0.85
CSPG5-201ENST00000264723 NSUN2Q08J23 767 aaKnown RBP eCLIP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms