RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 A0A088AWK7 358 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 GOLGA8TH3BQL2 631 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 CREB3O43889 395 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 SIN3BO75182 1162 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 VTNP04004 478 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 DESP17661 470 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 INHBEP58166 350 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 GLRA4Q5JXX5 417 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 GJC2Q5T442 439 aaPredicted RBP12.77□□□□□ -0.36
CHMP3-201ENST00000263856 DHDDSQ86SQ9 333 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 FAM131BQ86XD5 332 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 MYLK4Q86YV6 388 aaPredicted RBP12.77□□□□□ -0.36
CHMP3-201ENST00000263856 PHTF2Q8N3S3 785 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 ADAM32Q8TC27 787 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 NDRG1Q92597 394 aaKnown RBP12.77□□□□□ -0.36
CHMP3-201ENST00000263856 S100A14Q9HCY8 104 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 XPNPEP3Q9NQH7 507 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 ETAA1Q9NY74 926 aa12.77□□□□□ -0.36
CHMP3-201ENST00000263856 A0A087WZ62 844 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 ARIH2O95376 493 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 HSPA4LO95757 839 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 IQCF3P0C7M6 154 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 ATP6V1B1P15313 513 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 TCN1P20061 433 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 IL4RP24394 825 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 SLC10A2Q12908 348 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 DLG1Q12959 904 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 MXD4Q14582 209 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 CNPY1Q3B7I2 92 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 NXNQ6DKJ4 435 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 SESTD1Q86VW0 696 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 OR6B3Q8NGW1 331 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 CDKL2Q92772 493 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 SIGLEC10Q96LC7 697 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 SPATA33Q96N06 139 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 FDXACB1Q9BRP7 624 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 CENPKQ9BS16 269 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 NRDE2Q9H7Z3 1164 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 TMPRSS4Q9NRS4 437 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 ADAMTS6Q9UKP5 1117 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 F8W8V4 182 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 KLF11O14901 512 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 VDRP11473 427 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 P4HA1P13674 534 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 TBL3Q12788 808 aaKnown RBP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 PDE1CQ14123 709 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 CMPK2Q5EBM0 449 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 DCAF15Q66K64 600 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 GADL1Q6ZQY3 521 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 CYP4V2Q6ZWL3 525 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 CDKL3Q8IVW4 592 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 FBXO16Q8IX29 292 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-201ENST00000263856 PIP4K2CQ8TBX8 421 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 MARK4Q96L34 752 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 APOL2Q9BQE5 337 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 CAB39LQ9H9S4 337 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 CLIC5Q9NZA1 410 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 TMEM216Q9P0N5 145 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 FIS1Q9Y3D6 152 aa12.77□□□□□ -0.37
CHMP3-201ENST00000263856 SDR42E2A6NKP2 422 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 ACKR2O00590 384 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 OR6B1O95007 311 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 GOT1P17174 413 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 PRKCHP24723 683 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 CRHR1P34998 444 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 GMPSP49915 693 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-201ENST00000263856 TARBP2Q15633 366 aaKnown RBP12.76□□□□□ -0.37
CHMP3-201ENST00000263856 Q3C1V9 767 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 PPP2R3CQ969Q6 453 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 HESX1Q9UBX0 185 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 MRPL42Q9Y6G3 142 aaKnown RBP12.76□□□□□ -0.37
CHMP3-201ENST00000263856 MYOCOSA0A1B0GUC4 107 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 CAPN8A6NHC0 703 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 TSHRP16473 764 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-201ENST00000263856 BTKQ06187 659 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 TMEM62Q0P6H9 643 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 TMEM132DQ14C87 1099 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 TAZQ16635 292 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 BOLA3Q53S33 107 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 TEDDM1Q5T9Z0 273 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 FRMD7Q6ZUT3 714 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 SATL1Q86VE3 508 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 COLGALT1Q8NBJ5 622 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.76□□□□□ -0.37
CHMP3-201ENST00000263856 USP13Q92995 863 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-201ENST00000263856 TRAPPC9Q96Q05 1148 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 NT5C1AQ9BXI3 368 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 AP4E1Q9UPM8 1137 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 PCDHA11Q9Y5I1 949 aa12.76□□□□□ -0.37
CHMP3-201ENST00000263856 TRDMT1O14717 391 aaKnown RBP12.75□□□□□ -0.37
CHMP3-201ENST00000263856 ATP9BO43861 1147 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 TRPA1O75762 1119 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 C1QAP02745 245 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 ALDOAP04075 364 aaKnown RBP12.75□□□□□ -0.37
CHMP3-201ENST00000263856 RALBP11234 206 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 NUDT2P50583 147 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms