RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 NADSYN1Q6IA69 706 aa19.05■□□□□ 0.64
SDF4-201ENST00000263741 TMEM25Q86YD3 366 aa19.05■□□□□ 0.64
SDF4-201ENST00000263741 SIX5Q8N196 739 aa19.05■□□□□ 0.64
SDF4-201ENST00000263741 FAM172AQ8WUF8 416 aa19.05■□□□□ 0.64
SDF4-201ENST00000263741 ATP2A3Q93084 1043 aa19.05■□□□□ 0.64
SDF4-201ENST00000263741 CHFRQ96EP1 664 aa19.05■□□□□ 0.64
SDF4-201ENST00000263741 NUP85Q9BW27 656 aa19.05■□□□□ 0.64
SDF4-201ENST00000263741 EPHX3Q9H6B9 360 aa19.05■□□□□ 0.64
SDF4-201ENST00000263741 ECT2Q9H8V3 914 aa19.05■□□□□ 0.64
SDF4-201ENST00000263741 RIOK3O14730 519 aaKnown RBP19.04■□□□□ 0.64
SDF4-201ENST00000263741 H2AFZP0C0S5 128 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 RING1Q06587 406 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 NNTQ13423 1086 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 NUGGCQ68CJ6 796 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 RFWD3Q6PCD5 774 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 H2AFVQ71UI9 128 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 ARCQ7LC44 396 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 TMTC1Q8IUR5 882 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 ADGRG2Q8IZP9 1017 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 DNASE1L2Q92874 299 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 MYEOVQ96EZ4 313 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 ARHGEF3Q9NR81 526 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 TBC1D14Q9P2M4 693 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 PAXBP1Q9Y5B6 917 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 PIAS3Q9Y6X2 628 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 DOCK4Q8N1I0 1966 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 SLC9A3R1O14745 358 aaPredicted RBP19.04■□□□□ 0.64
SDF4-201ENST00000263741 TSPAN3O60637 253 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 PDGFBP01127 241 aaPredicted RBP19.04■□□□□ 0.64
SDF4-201ENST00000263741 APOEP02649 317 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 CYP1A2P05177 515 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 SLC6A4P31645 630 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 GBP1P32455 592 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 SGSHP51688 502 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 KPNA1P52294 538 aaPredicted RBP19.04■□□□□ 0.64
SDF4-201ENST00000263741 GSDMDP57764 484 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 PFKPQ01813 784 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 DHCR24Q15392 516 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 ITPRIPL2Q3MIP1 535 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 RHBDF2Q6PJF5 856 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 TPRG1Q6ZUI0 275 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 CPA6Q8N4T0 437 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 ACRBPQ8NEB7 543 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 CTNNBL1Q8WYA6 563 aaPredicted RBP19.04■□□□□ 0.64
SDF4-201ENST00000263741 EDAQ92838 391 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 DESI2Q9BSY9 194 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 DCLK3Q9C098 648 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 PLK2Q9NYY3 685 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 SNX10Q9Y5X0 201 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 SCINQ9Y6U3 715 aa19.04■□□□□ 0.64
SDF4-201ENST00000263741 ZDBF2Q9HCK1 2354 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 TMEM191CA6NGB0 347 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 NDUFA10O95299 355 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 NFATC1O95644 943 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 PSMA2P25787 234 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 RDXP35241 583 aaKnown RBP19.03■□□□□ 0.64
SDF4-201ENST00000263741 PTPN9P43378 593 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 ZNF143P52747 638 aaPredicted RBP19.03■□□□□ 0.64
SDF4-201ENST00000263741 HDAC4P56524 1084 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 SLC44A4Q53GD3 710 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 FAM133BQ5BKY9 247 aaKnown RBP19.03■□□□□ 0.64
SDF4-201ENST00000263741 TXNDC11Q6PKC3 985 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 BNIPLQ7Z465 357 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 RRN3Q9NYV6 651 aa19.03■□□□□ 0.64
SDF4-201ENST00000263741 REXO2Q9Y3B8 237 aaKnown RBP19.03■□□□□ 0.64
SDF4-201ENST00000263741 EPN1Q9Y6I3 576 aaPredicted RBP19.03■□□□□ 0.64
SDF4-201ENST00000263741 CCR1P32246 355 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 CYLC1P35663 651 aaPredicted RBP19.02■□□□□ 0.64
SDF4-201ENST00000263741 CXCR3P49682 368 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 MLF2Q15773 248 aaPredicted RBP19.02■□□□□ 0.64
SDF4-201ENST00000263741 GAB4Q2WGN9 574 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 ANO4Q32M45 955 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 RAP1GAP2Q684P5 730 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 C12orf40Q86WS4 652 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 UNC45BQ8IWX7 931 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 CCDC170Q8IYT3 715 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 TKTL2Q9H0I9 626 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 OSGEPQ9NPF4 335 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 SPHK2Q9NRA0 654 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 CTTNBP2NLQ9P2B4 639 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 ANAPC7Q9UJX3 599 aa19.02■□□□□ 0.64
SDF4-201ENST00000263741 SHISA7A6NL88 538 aa19.02■□□□□ 0.63
SDF4-201ENST00000263741 NEDD8-MDP1E9PL57 170 aa19.02■□□□□ 0.63
SDF4-201ENST00000263741 ACSL4O60488 711 aa19.02■□□□□ 0.63
SDF4-201ENST00000263741 CTHP32929 405 aa19.02■□□□□ 0.63
SDF4-201ENST00000263741 GJA4P35212 333 aa19.02■□□□□ 0.63
SDF4-201ENST00000263741 SIGLEC14Q08ET2 396 aa19.02■□□□□ 0.63
SDF4-201ENST00000263741 PIK3R6Q5UE93 754 aa19.02■□□□□ 0.63
SDF4-201ENST00000263741 CPNE8Q86YQ8 564 aa19.02■□□□□ 0.63
SDF4-201ENST00000263741 ZNF564Q8TBZ8 553 aaPredicted RBP19.02■□□□□ 0.63
SDF4-201ENST00000263741 PGAP3Q96FM1 320 aaPredicted RBP19.02■□□□□ 0.63
SDF4-201ENST00000263741 C16orf45Q96MC5 204 aaPredicted RBP19.02■□□□□ 0.63
SDF4-201ENST00000263741 CNPY3Q9BT09 278 aa19.02■□□□□ 0.63
SDF4-201ENST00000263741 MRPL47Q9HD33 250 aaKnown RBP19.02■□□□□ 0.63
SDF4-201ENST00000263741 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.02■□□□□ 0.632e-6■■■■□ 23.1
SDF4-201ENST00000263741 FAM86C2PA6NEL3 165 aa19.01■□□□□ 0.63
SDF4-201ENST00000263741 KCNU1A8MYU2 1149 aa19.01■□□□□ 0.63
SDF4-201ENST00000263741 SPECC1L-ADORA2AF8WAN1 911 aa19.01■□□□□ 0.63
SDF4-201ENST00000263741 PAGE1O75459 146 aa19.01■□□□□ 0.63
SDF4-201ENST00000263741 LCA5LO95447 670 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms