RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 DKK4Q9UBT3 224 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 CELSR3Q9NYQ7 3312 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 A0A087WV48 116 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 ATXN7O15265 892 aaPredicted RBP13.97□□□□□ -0.17
SGCA-201ENST00000262018 URI1O94763 535 aaPredicted RBP13.97□□□□□ -0.17
SGCA-201ENST00000262018 ASS1P00966 412 aaKnown RBP13.97□□□□□ -0.17
SGCA-201ENST00000262018 TNNC2P02585 160 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 F11P03951 625 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 SYPP08247 313 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 TMEM191BP0C7N4 346 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 TBXAS1P24557 533 aaPredicted RBP13.97□□□□□ -0.17
SGCA-201ENST00000262018 LRPAP1P30533 357 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 ABCG1P45844 678 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 TFAMQ00059 246 aaKnown RBP13.97□□□□□ -0.17
SGCA-201ENST00000262018 SLC14A1Q13336 389 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 CUL2Q13617 745 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 SLC39A12Q504Y0 691 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 RABEPKQ7Z6M1 372 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 SCUBE3Q8IX30 993 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 PIP4K2CQ8TBX8 421 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 HMGB4Q8WW32 186 aa13.97□□□□□ -0.17
SGCA-201ENST00000262018 MRPS31Q92665 395 aaKnown RBP13.97□□□□□ -0.17
SGCA-201ENST00000262018 NOCTQ9UK39 431 aaKnown RBP13.97□□□□□ -0.17
SGCA-201ENST00000262018 ZNF638Q14966 1978 aaKnown RBP13.97□□□□□ -0.17
SGCA-201ENST00000262018 PTPRDP23468 1912 aa13.96□□□□□ -0.17
SGCA-201ENST00000262018 MACROD2A1Z1Q3 448 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 CYP26A1O43174 497 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 KALRNO60229 2985 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 TACC1O75410 805 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 CST3P01034 146 aaPredicted RBP13.96□□□□□ -0.18
SGCA-201ENST00000262018 H2AFZP0C0S5 128 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 TYMPP19971 482 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 USP8P40818 1118 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 AARSP49588 968 aaKnown RBP eCLIP13.96□□□□□ -0.18
SGCA-201ENST00000262018 NOP14P78316 857 aaKnown RBP13.96□□□□□ -0.18
SGCA-201ENST00000262018 RPL6Q02878 288 aaKnown RBP13.96□□□□□ -0.18
SGCA-201ENST00000262018 ZNF268Q14587 947 aaPredicted RBP13.96□□□□□ -0.18
SGCA-201ENST00000262018 SGSM1Q2NKQ1 1148 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 EML3Q32P44 896 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 SPOPLQ6IQ16 392 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 H2AFVQ71UI9 128 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 MON1AQ86VX9 555 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 MARCH9Q86YJ5 346 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 ALLCQ8N6M5 410 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 TXNDC5Q8NBS9 432 aaKnown RBP13.96□□□□□ -0.18
SGCA-201ENST00000262018 TRIM58Q8NG06 486 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 EPS8L1Q8TE68 723 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 ELMO3Q96BJ8 720 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 DCBLD2Q96PD2 775 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 PACSIN1Q9BY11 444 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 IMPG2Q9BZV3 1241 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 DPP3Q9NY33 737 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 SALL4Q9UJQ4 1053 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 ITGA11Q9UKX5 1188 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 CNTN6Q9UQ52 1028 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 MRFAP1Q9Y605 127 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 PCDH15Q96QU1 1955 aa13.96□□□□□ -0.18
SGCA-201ENST00000262018 MYH10P35580 1976 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 ANO9A1A5B4 782 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 TRABD2BA6NFA1 517 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 J3QKU1 62 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 MOCS3O95396 460 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 KLF8O95600 359 aaPredicted RBP13.95□□□□□ -0.18
SGCA-201ENST00000262018 CHRNB2P17787 502 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 ACO1P21399 889 aaKnown RBP13.95□□□□□ -0.18
SGCA-201ENST00000262018 PAX3P23760 479 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 MRPS21P82921 87 aaKnown RBP13.95□□□□□ -0.18
SGCA-201ENST00000262018 TRPC3Q13507 836 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 TMPRSS7Q7RTY8 843 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 NOP9Q86U38 636 aaKnown RBP13.95□□□□□ -0.18
SGCA-201ENST00000262018 ZNF843Q8N446 348 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 UBR7Q8N806 425 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 OR10T2Q8NGX3 314 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 TAF4BQ92750 862 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 FAXDC2Q96IV6 333 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 NOX5Q96PH1 765 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 MAGED2Q9UNF1 606 aaPredicted RBP13.95□□□□□ -0.18
SGCA-201ENST00000262018 CAPN6Q9Y6Q1 641 aa13.95□□□□□ -0.18
SGCA-201ENST00000262018 A0A0A6YYK5 440 aaPredicted RBP13.94□□□□□ -0.18
SGCA-201ENST00000262018 SGK1O00141 431 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 RRP9O43818 475 aaKnown RBP13.94□□□□□ -0.18
SGCA-201ENST00000262018 GJB3O75712 270 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 SLU7O95391 586 aaKnown RBP13.94□□□□□ -0.18
SGCA-201ENST00000262018 CYP11B1P15538 503 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 HMGA1P17096 107 aaKnown RBP13.94□□□□□ -0.18
SGCA-201ENST00000262018 TIE1P35590 1138 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 OPRD1P41143 372 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 GUCY2FP51841 1108 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 BPIFB4P59827 614 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 MYL6P60660 151 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 ZNF33AQ06730 810 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 ZNF77Q15935 545 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 C9orf57Q5W0N0 161 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 PAPD7Q5XG87 772 aaKnown RBP13.94□□□□□ -0.18
SGCA-201ENST00000262018 SCARA3Q6AZY7 606 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 SLC47A2Q86VL8 602 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 C1orf127Q8N9H9 656 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 IL17RCQ8NAC3 791 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 STKLD1Q8NE28 680 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms