RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ASIC4Q96FT7 647 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 ZFYVE19Q96K21 471 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 SLC2A13Q96QE2 648 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 POPDC2Q9HBU9 364 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 OLA1Q9NTK5 396 aaKnown RBP12.06□□□□□ -0.48
PFDN1-201ENST00000261813 TRMT1Q9NXH9 659 aaKnown RBP12.06□□□□□ -0.48
PFDN1-201ENST00000261813 MARCH2Q9P0N8 246 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 CFAP97Q9P2B7 532 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 SFMBT1Q9UHJ3 866 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 LCMT1Q9UIC8 334 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 STRIP2Q9ULQ0 834 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 TMCO5BA8MYB1 307 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 GOLGA8SH3BPF8 625 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 SCAMP3O14828 347 aaKnown RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 ZNF263O14978 683 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 CHADO15335 359 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 HSF2BPO75031 334 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 GLI1P08151 1106 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 IRF1P10914 325 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 NCAM1P13591 858 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 SCNN1AP37088 669 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 GSCP56915 257 aaPredicted RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 YWHAZP63104 245 aaKnown RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 PITX1P78337 314 aaPredicted RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 ZXDAP98168 799 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 TCEAL1Q15170 157 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 EFHC1Q5JVL4 640 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 FAM102AQ5T9C2 384 aaPredicted RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 PHLDB2Q86SQ0 1253 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 RETREG3Q86VR2 466 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 DDX42Q86XP3 938 aaKnown RBP eCLIP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 REXO1L1PQ8IX06 675 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 RHOT2Q8IXI1 618 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 YAF2Q8IY57 180 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 UBALD2Q8IYN6 164 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 DEFB106AQ8N104 65 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 DQX1Q8TE96 717 aaKnown RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 PRRX2Q99811 253 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 FAM83CQ9BQN1 747 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 KDM4CQ9H3R0 1056 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 BRD9Q9H8M2 597 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 MRPL47Q9HD33 250 aaKnown RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 SLC2A4RGQ9NR83 387 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 ADAM22Q9P0K1 906 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 WDR35Q9P2L0 1181 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 REXO2Q9Y3B8 237 aaKnown RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 WNT6Q9Y6F9 365 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 COL4A2P08572 1712 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 SLC12A8A0AV02 714 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 CAPN9O14815 690 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 MSI1O43347 362 aaKnown RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 DAB1O75553 588 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 STC2O76061 302 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 GJB6O95452 261 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 HMBSP08397 361 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 GALCP54803 685 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 TNK2Q07912 1038 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 TRIM68Q6AZZ1 485 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 TRNP1Q6NT89 227 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 TAC4Q86UU9 113 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 SUGP1Q8IWZ8 645 aaKnown RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 MCOLN2Q8IZK6 566 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 OSCP1Q8WVF1 389 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 EDAQ92838 391 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 ALS2CR12Q96Q35 445 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 TRIM62Q9BVG3 475 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 LINC00597Q9H2U6 94 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 LZTFL1Q9NQ48 299 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 HPS4Q9NQG7 708 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 METTL5Q9NRN9 209 aaKnown RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 THG1LQ9NWX6 298 aaKnown RBP12.05□□□□□ -0.48
PFDN1-201ENST00000261813 UVRAGQ9P2Y5 699 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 TMEM59LQ9UK28 342 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 SH3BP1Q9Y3L3 701 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 SCINQ9Y6U3 715 aa12.05□□□□□ -0.48
PFDN1-201ENST00000261813 MYO10Q9HD67 2058 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 TCRBV5S1A1TA0A578 114 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 E2F8A0AVK6 867 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 IGLV3-25P01717 112 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 KLKB1P03952 638 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 ARSAP15289 507 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 FLT3P36888 993 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 SLC19A1P41440 591 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 RNASE9P60153 205 aaKnown RBP12.04□□□□□ -0.48
PFDN1-201ENST00000261813 COG7P83436 770 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 TRIP4Q15650 581 aaPredicted RBP12.04□□□□□ -0.48
PFDN1-201ENST00000261813 EML3Q32P44 896 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 DCAF6Q58WW2 860 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 OTUD1Q5VV17 481 aaPredicted RBP12.04□□□□□ -0.48
PFDN1-201ENST00000261813 CC2D1AQ6P1N0 951 aaPredicted RBP12.04□□□□□ -0.48
PFDN1-201ENST00000261813 LIAT1Q6ZQX7 453 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 HTR3DQ70Z44 454 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 BBS7Q8IWZ6 715 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 KIAA1958Q8N8K9 716 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 TRIM58Q8NG06 486 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 ADAM32Q8TC27 787 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 RFFLQ8WZ73 363 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 DNASE1L2Q92874 299 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 IRF7Q92985 503 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 EBF3Q9H4W6 596 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms