RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RSAD2Q8WXG1 361 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 NT5C3BQ969T7 300 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 TBCBQ99426 244 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 COX16Q9P0S2 106 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 TLR6Q9Y2C9 796 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 SPOPO43791 374 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 ATP1A1P05023 1023 aaKnown RBP21.5■■□□□ 1.03
RTCA-201ENST00000260563 ASGR2P07307 311 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 PSMC3P17980 439 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 PTPN9P43378 593 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 NME3Q13232 169 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 CDO1Q16878 200 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 OTUD1Q5VV17 481 aaPredicted RBP21.5■■□□□ 1.03
RTCA-201ENST00000260563 MFSD6LQ8IWD5 586 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 YAF2Q8IY57 180 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 KIF18AQ8NI77 898 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 RIN3Q8TB24 985 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 PGAP3Q96FM1 320 aaPredicted RBP21.5■■□□□ 1.03
RTCA-201ENST00000260563 PLA2G2FQ9BZM2 168 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 STC2O76061 302 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 ATP11AP98196 1134 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 RING1Q06587 406 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 GRM2Q14416 872 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 ACAP1Q15027 740 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 C15orf59Q2T9L4 293 aaPredicted RBP21.5■■□□□ 1.03
RTCA-201ENST00000260563 CCDC14Q49A88 953 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 NUGGCQ68CJ6 796 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 CC2D1AQ6P1N0 951 aaPredicted RBP21.5■■□□□ 1.03
RTCA-201ENST00000260563 SND1Q7KZF4 910 aaKnown RBP eCLIP21.5■■□□□ 1.03
RTCA-201ENST00000260563 CPNE8Q86YQ8 564 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 UBE2Q2Q8WVN8 375 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 CNPY3Q9BT09 278 aa21.5■■□□□ 1.03
RTCA-201ENST00000260563 RPP25Q9BUL9 199 aaKnown RBP21.5■■□□□ 1.03
RTCA-201ENST00000260563 THG1LQ9NWX6 298 aaKnown RBP21.5■■□□□ 1.03
RTCA-201ENST00000260563 PACSIN2Q9UNF0 486 aaPredicted RBP21.5■■□□□ 1.03
RTCA-201ENST00000260563 E2F8A0AVK6 867 aa21.49■■□□□ 1.03
RTCA-201ENST00000260563 IGLV3-27P01718 113 aa21.49■■□□□ 1.03
RTCA-201ENST00000260563 TFE3P19532 575 aaPredicted RBP21.49■■□□□ 1.03
RTCA-201ENST00000260563 CORO1AP31146 461 aaKnown RBP21.49■■□□□ 1.03
RTCA-201ENST00000260563 RDXP35241 583 aaKnown RBP21.49■■□□□ 1.03
RTCA-201ENST00000260563 HARS2P49590 506 aaKnown RBP21.49■■□□□ 1.03
RTCA-201ENST00000260563 DEUP1Q05D60 604 aa21.49■■□□□ 1.03
RTCA-201ENST00000260563 FCHO2Q0JRZ9 810 aa21.49■■□□□ 1.03
RTCA-201ENST00000260563 DAB2IPQ5VWQ8 1189 aa21.49■■□□□ 1.03
RTCA-201ENST00000260563 LRRC3BQ96PB8 259 aa21.49■■□□□ 1.03
RTCA-201ENST00000260563 TLR10Q9BXR5 811 aa21.49■■□□□ 1.03
RTCA-201ENST00000260563 ADAM33Q9BZ11 813 aa21.49■■□□□ 1.03
RTCA-201ENST00000260563 DCLK3Q9C098 648 aa21.49■■□□□ 1.03
RTCA-201ENST00000260563 VCANP13611 3396 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 COL4A2P08572 1712 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 F9P00740 461 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 APOEP02649 317 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 EIF4EBP2Q13542 120 aaPredicted RBP21.48■■□□□ 1.03
RTCA-201ENST00000260563 RPS6KA1Q15418 735 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 STRADAQ7RTN6 431 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 BNIPLQ7Z465 357 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 UNC45BQ8IWX7 931 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 KIAA1958Q8N8K9 716 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 FAM172AQ8WUF8 416 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 CD101Q93033 1021 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 RNF34Q969K3 372 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 WBP2Q969T9 261 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 SLC39A13Q96H72 371 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 HES6Q96HZ4 224 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 FCRL2Q96LA5 508 aaPredicted RBP21.48■■□□□ 1.03
RTCA-201ENST00000260563 TRMT61BQ9BVS5 477 aaKnown RBP21.48■■□□□ 1.03
RTCA-201ENST00000260563 PIGVQ9NUD9 493 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 TMEM51Q9NW97 253 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 CALCOCO1Q9P1Z2 691 aa21.48■■□□□ 1.03
RTCA-201ENST00000260563 SCAMP3O14828 347 aaKnown RBP21.47■■□□□ 1.03
RTCA-201ENST00000260563 RNF8O76064 485 aa21.47■■□□□ 1.03
RTCA-201ENST00000260563 SLC2A3P11169 496 aa21.47■■□□□ 1.03
RTCA-201ENST00000260563 CCR1P32246 355 aa21.47■■□□□ 1.03
RTCA-201ENST00000260563 PAPD7Q5XG87 772 aaKnown RBP21.47■■□□□ 1.03
RTCA-201ENST00000260563 HTR3DQ70Z44 454 aa21.47■■□□□ 1.03
RTCA-201ENST00000260563 GJD3Q8N144 294 aa21.47■■□□□ 1.03
RTCA-201ENST00000260563 OSCP1Q8WVF1 389 aa21.47■■□□□ 1.03
RTCA-201ENST00000260563 ZNF510Q9Y2H8 683 aa21.47■■□□□ 1.03
RTCA-201ENST00000260563 MIF4GDA9UHW6 222 aaKnown RBP21.46■■□□□ 1.03
RTCA-201ENST00000260563 SLC9A3R1O14745 358 aaPredicted RBP21.46■■□□□ 1.03
RTCA-201ENST00000260563 LRCH4O75427 683 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 GDI1P31150 447 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 IFNAR2P48551 515 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 ZC3H12AQ5D1E8 599 aaKnown RBP21.46■■□□□ 1.03
RTCA-201ENST00000260563 SH3PXD2AQ5TCZ1 1133 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 Q6ZNB5 142 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 DENND1CQ8IV53 801 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 SLC44A3Q8N4M1 653 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 ARFGAP1Q8N6T3 406 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 CENPIQ92674 756 aaPredicted RBP21.46■■□□□ 1.03
RTCA-201ENST00000260563 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.46■■□□□ 1.03
RTCA-201ENST00000260563 DUS2Q9NX74 493 aaKnown RBP21.46■■□□□ 1.03
RTCA-201ENST00000260563 TBC1D14Q9P2M4 693 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 WNT6Q9Y6F9 365 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 COL4A3Q01955 1670 aa21.46■■□□□ 1.03
RTCA-201ENST00000260563 CHADO15335 359 aa21.45■■□□□ 1.02
RTCA-201ENST00000260563 GREM1O60565 184 aa21.45■■□□□ 1.02
RTCA-201ENST00000260563 ENDOD1O94919 500 aa21.45■■□□□ 1.02
RTCA-201ENST00000260563 MOCS2O96007 188 aaPredicted RBP21.45■■□□□ 1.02
RTCA-201ENST00000260563 CTNNA2P26232 953 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms