RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 HNRNPDQ14103 355 aaKnown RBP4.15□□□□□ -1.75
RNF38-201ENST00000259605 SGCBQ16585 318 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 SLC39A12Q504Y0 691 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 HSP90AA5PQ58FG0 334 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 PCNX4Q63HM2 1172 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 PGM2L1Q6PCE3 622 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 ISLR2Q6UXK2 745 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 TPGS1Q6ZTW0 290 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 PAGE2Q7Z2X7 111 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 GALNT13Q8IUC8 556 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 GMCL1P1Q8NEA9 526 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 RAD54LQ92698 747 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 NSUN4Q96CB9 384 aaKnown RBP4.15□□□□□ -1.75
RNF38-201ENST00000259605 KLRG1Q96E93 195 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 SIPA1Q96FS4 1042 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 KLHL5Q96PQ7 755 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 LGMNQ99538 433 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 BTBD1Q9H0C5 482 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 GANQ9H2C0 597 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 LRMDAQ9H2I8 198 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 DPEP2Q9H4A9 486 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 ZDHHC6Q9H6R6 413 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 VPS45Q9NRW7 570 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 FAM49BQ9NUQ9 324 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 NKIRAS2Q9NYR9 191 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 MARCH2Q9P0N8 246 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 TMCC3Q9ULS5 477 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 ZNF232Q9UNY5 417 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 ZMYM4Q5VZL5 1548 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 PGRMC1O00264 195 aaKnown RBP4.15□□□□□ -1.75
RNF38-201ENST00000259605 TAF4O00268 1085 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 DDX3XO00571 662 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNF38-201ENST00000259605 ZBTB14O43829 449 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 NTSR2O95665 410 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 CER1O95813 267 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 CYB5AP00167 134 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 TP53P04637 393 aaPredicted RBP4.15□□□□□ -1.75
RNF38-201ENST00000259605 ITGB3P05106 788 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 LYNP07948 512 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 ZNF286BP0CG31 522 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 ARP10275 920 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 COL6A1P12109 1028 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 CYP11B2P19099 503 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 UBA1P22314 1058 aaKnown RBP4.15□□□□□ -1.75
RNF38-201ENST00000259605 EIF4BP23588 611 aaKnown RBP4.15□□□□□ -1.75
RNF38-201ENST00000259605 CHI3L1P36222 383 aaPredicted RBP4.15□□□□□ -1.75
RNF38-201ENST00000259605 SERPINB4P48594 390 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 PLOD1Q02809 727 aaPredicted RBP4.15□□□□□ -1.75
RNF38-201ENST00000259605 EHHADHQ08426 723 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 KRT31Q15323 416 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 TMEM31Q5JXX7 168 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 NAA35Q5VZE5 725 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 HDXQ7Z353 690 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 TRAPPC11Q7Z392 1133 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 ZSCAN4Q8NAM6 433 aaPredicted RBP4.15□□□□□ -1.75
RNF38-201ENST00000259605 TPCN2Q8NHX9 752 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 HMGB4Q8WW32 186 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 CLIP3Q96DZ5 547 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 HIST1H2AAQ96QV6 131 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 TLR9Q9NR96 1032 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 ABCC13Q9NSE7 274 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 SNX14Q9Y5W7 946 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 ADGRG1Q9Y653 693 aa4.15□□□□□ -1.75
RNF38-201ENST00000259605 A0A096LPK6 155 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 FAM221BA6H8Z2 402 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 TRIM64A6NGJ6 449 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 SLC16A3O15427 465 aaKnown RBP4.14□□□□□ -1.75
RNF38-201ENST00000259605 ENDOD1O94919 500 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 GJB6O95452 261 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 KRT6AP02538 564 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 VTNP04004 478 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 KRT6BP04259 564 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 TYK2P29597 1187 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 HSD17B3P37058 310 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 KRT6CP48668 564 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 RGS7P49802 495 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 SMAD3P84022 425 aaKnown RBP4.14□□□□□ -1.75
RNF38-201ENST00000259605 BST2Q10589 180 aaKnown RBP4.14□□□□□ -1.75
RNF38-201ENST00000259605 TRIM32Q13049 653 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 PCSK7Q16549 785 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 ZSCAN23Q3MJ62 389 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 LRRC8BQ6P9F7 803 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 SHQ1Q6PI26 577 aaKnown RBP4.14□□□□□ -1.75
RNF38-201ENST00000259605 ZDHHC17Q8IUH5 632 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 EGFL6Q8IUX8 553 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 LGI2Q8N0V4 545 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 SNIP1Q8TAD8 396 aaKnown RBP4.14□□□□□ -1.75
RNF38-201ENST00000259605 SAAL1Q96ER3 474 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 RMDN2Q96LZ7 410 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 CAPS2Q9BXY5 557 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 NIFKQ9BYG3 293 aaKnown RBP4.14□□□□□ -1.75
RNF38-201ENST00000259605 SFXN1Q9H9B4 322 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 POLR1BQ9H9Y6 1135 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 ZBTB40Q9NUA8 1239 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 DNAAF2Q9NVR5 837 aaKnown RBP4.14□□□□□ -1.75
RNF38-201ENST00000259605 ZSWIM5Q9P217 1185 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 PCDH10Q9P2E7 1040 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 FTSJ1Q9UET6 329 aa4.14□□□□□ -1.75
RNF38-201ENST00000259605 CHORDC1Q9UHD1 332 aaPredicted RBP4.14□□□□□ -1.75
RNF38-201ENST00000259605 PADI4Q9UM07 663 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms