RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CNOT10Q9H9A5 744 aaKnown RBP28.63■■■□□ 2.17
CCM2-201ENST00000258781 DTLQ9NZJ0 730 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 E7ESA3 106 aa28.62■■■□□ 2.17
CCM2-201ENST00000258781 SLCO1A2P46721 670 aa28.62■■■□□ 2.17
CCM2-201ENST00000258781 SLC11A1P49279 550 aa28.62■■■□□ 2.17
CCM2-201ENST00000258781 PDIA2Q13087 525 aaKnown RBP28.62■■■□□ 2.17
CCM2-201ENST00000258781 KCNJ11Q14654 390 aa28.62■■■□□ 2.17
CCM2-201ENST00000258781 NFE2Q16621 373 aaPredicted RBP28.62■■■□□ 2.17
CCM2-201ENST00000258781 ARL13BQ3SXY8 428 aa28.62■■■□□ 2.17
CCM2-201ENST00000258781 SLC39A12Q504Y0 691 aa28.62■■■□□ 2.17
CCM2-201ENST00000258781 FAM117BQ6P1L5 589 aa28.62■■■□□ 2.17
CCM2-201ENST00000258781 FUBP3Q96I24 572 aaKnown RBP eCLIP28.62■■■□□ 2.17
CCM2-201ENST00000258781 MARCH5Q9NX47 278 aa28.62■■■□□ 2.17
CCM2-201ENST00000258781 XPO7Q9UIA9 1087 aaKnown RBP28.62■■■□□ 2.17
CCM2-201ENST00000258781 MYO16Q9Y6X6 1858 aa28.62■■■□□ 2.17
CCM2-201ENST00000258781 TMEM63AO94886 807 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 CXCR3P49682 368 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 ZNF135P52742 658 aaPredicted RBP28.61■■■□□ 2.17
CCM2-201ENST00000258781 NRLP54845 237 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 DPYSQ14117 519 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 ADAM32Q8TC27 787 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 COLEC11Q9BWP8 271 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 RC3H2Q9HBD1 1191 aaKnown RBP28.61■■■□□ 2.17
CCM2-201ENST00000258781 TMPRSS4Q9NRS4 437 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 ETNK2Q9NVF9 386 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.61■■■□□ 2.171e-8■■□□□ 13.3
CCM2-201ENST00000258781 ADAM28Q9UKQ2 775 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 GOLGA8MH3BSY2 632 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 EEF2KO00418 725 aaKnown RBP28.61■■■□□ 2.17
CCM2-201ENST00000258781 TNFRSF10BO14763 440 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 AMHP03971 560 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 GRIK1P39086 918 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 HCAR3P49019 387 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 CBLBQ13191 982 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 SEMA3BQ13214 749 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 FASTKD3Q14CZ7 662 aaKnown RBP28.61■■■□□ 2.17
CCM2-201ENST00000258781 KCNT2Q6UVM3 1135 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 PPP1R21Q6ZMI0 780 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 TMEM173Q86WV6 379 aaPredicted RBP28.61■■■□□ 2.17
CCM2-201ENST00000258781 ZBED8Q8IZ13 594 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 EDEM1Q92611 657 aa28.61■■■□□ 2.17
CCM2-201ENST00000258781 TCRBV7S3A2A0A539 114 aa28.6■■■□□ 2.17
CCM2-201ENST00000258781 NT5C1B-RDH14C9J2C7 533 aa28.6■■■□□ 2.17
CCM2-201ENST00000258781 GCATO75600 419 aa28.6■■■□□ 2.17
CCM2-201ENST00000258781 MAP3K6O95382 1288 aa28.6■■■□□ 2.17
CCM2-201ENST00000258781 ATP5DP30049 168 aa28.6■■■□□ 2.17
CCM2-201ENST00000258781 PAFAH1B3Q15102 231 aaKnown RBP28.6■■■□□ 2.17
CCM2-201ENST00000258781 VARS2Q5ST30 1063 aaKnown RBP28.6■■■□□ 2.17
CCM2-201ENST00000258781 RFX8Q6ZV50 586 aa28.6■■■□□ 2.17
CCM2-201ENST00000258781 PDIK1LQ8N165 341 aa28.6■■■□□ 2.17
CCM2-201ENST00000258781 FRMD8Q9BZ67 464 aaPredicted RBP28.6■■■□□ 2.17
CCM2-201ENST00000258781 LGALS13Q9UHV8 139 aa28.6■■■□□ 2.17
CCM2-201ENST00000258781 BAIAP3O94812 1187 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 GALTP07902 379 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 OR4Q2P0C623 313 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 SYN1P17600 705 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 MAGEA6P43360 314 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 SLC5A3P53794 718 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 IFI35P80217 286 aaPredicted RBP28.59■■■□□ 2.17
CCM2-201ENST00000258781 GAD2Q05329 585 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 ZNF689Q96CS4 500 aaPredicted RBP28.59■■■□□ 2.17
CCM2-201ENST00000258781 KLC2Q9H0B6 622 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 RAB6BQ9NRW1 208 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 PLXNA3P51805 1871 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 C5orf60A6NFR6 353 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 SRRM3A6NNA2 597 aaPredicted RBP28.59■■■□□ 2.17
CCM2-201ENST00000258781 CREB3O43889 395 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 EFCAB14O75071 495 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 ALDH2P05091 517 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 GUCY1A3Q02108 690 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 FPGSQ05932 587 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 MRPL58Q14197 206 aaKnown RBP28.59■■■□□ 2.17
CCM2-201ENST00000258781 FNBP1LQ5T0N5 605 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 VSTM1Q6UX27 236 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 LRRC31Q6UY01 552 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 TAC4Q86UU9 113 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 RIBC1Q8N443 379 aaPredicted RBP28.59■■■□□ 2.17
CCM2-201ENST00000258781 TAB3Q8N5C8 712 aaPredicted RBP28.59■■■□□ 2.17
CCM2-201ENST00000258781 SCAMP5Q8TAC9 235 aa28.59■■■□□ 2.17
CCM2-201ENST00000258781 TFB1MQ8WVM0 346 aaKnown RBP28.59■■■□□ 2.17
CCM2-201ENST00000258781 ZMYND8Q9ULU4 1186 aaPredicted RBP28.59■■■□□ 2.17
CCM2-201ENST00000258781 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.59■■■□□ 2.17
CCM2-201ENST00000258781 MFSD11O43934 449 aa28.58■■■□□ 2.17
CCM2-201ENST00000258781 ZNF189O75820 626 aaPredicted RBP28.58■■■□□ 2.17
CCM2-201ENST00000258781 TSHRP16473 764 aa28.58■■■□□ 2.17
CCM2-201ENST00000258781 MMP13P45452 471 aa28.58■■■□□ 2.17
CCM2-201ENST00000258781 TTC19Q6DKK2 380 aaPredicted RBP28.58■■■□□ 2.17
CCM2-201ENST00000258781 TAOK1Q7L7X3 1001 aa28.58■■■□□ 2.17
CCM2-201ENST00000258781 DQX1Q8TE96 717 aaKnown RBP28.58■■■□□ 2.17
CCM2-201ENST00000258781 CWH43Q9H720 699 aa28.58■■■□□ 2.17
CCM2-201ENST00000258781 ABCC13Q9NSE7 274 aa28.58■■■□□ 2.17
CCM2-201ENST00000258781 MFHAS1Q9Y4C4 1052 aa28.58■■■□□ 2.17
CCM2-201ENST00000258781 RAD54BQ9Y620 910 aa28.58■■■□□ 2.17
CCM2-201ENST00000258781 ERICH4A6NGS2 130 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 OR6C75A6NL08 312 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 E7EVH7 732 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 DCLK1O15075 740 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 CDH16O75309 829 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 IGLV3-25P01717 112 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 YWHAGP61981 247 aaKnown RBP eCLIP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms