RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PEX6Q13608 980 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 TFDP2Q14188 446 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 HSP90AA5PQ58FG0 334 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 UBXN11Q5T124 520 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 RNASEH2BQ5TBB1 312 aaKnown RBP9.4□□□□□ -0.91
CKAP2-201ENST00000258607 BTBD8Q5XKL5 378 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 ZNF280DQ6N043 979 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 KIAA1841Q6NSI8 718 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 PRSS55Q6UWB4 352 aaPredicted RBP9.4□□□□□ -0.91
CKAP2-201ENST00000258607 FAM35AQ86V20 835 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 SPATA2LQ8IUW3 424 aaPredicted RBP9.4□□□□□ -0.91
CKAP2-201ENST00000258607 GPATCH11Q8N954 259 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 SHCBP1Q8NEM2 672 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 SLC35F5Q8WV83 523 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 DEFB118Q96PH6 123 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 STARD7Q9NQZ5 370 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 NDFIP2Q9NV92 336 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 VPS13AQ96RL7 3174 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 APOC4-APOC2K7ER74 178 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 CES2O00748 559 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 AXIN1O15169 862 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 LYPLA1O75608 230 aaPredicted RBP9.39□□□□□ -0.91
CKAP2-201ENST00000258607 APOC2P02655 101 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 PAEPP09466 180 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 ATXN8OSP0DMR3 200 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 ATP2A2P16615 1042 aaKnown RBP9.39□□□□□ -0.91
CKAP2-201ENST00000258607 PLK1P53350 603 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 C4orf50Q6ZRC1 276 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 BBS12Q6ZW61 710 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 MREGQ8N565 214 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 ANKRD52Q8NB46 1076 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 DBF4BQ8NFT6 615 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 MORC4Q8TE76 937 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 ATP2A3Q93084 1043 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 MFSD3Q96ES6 412 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 SMIM14Q96QK8 99 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 FAM129AQ9BZQ8 928 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 DTLQ9NZJ0 730 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 OR12D3Q9UGF7 316 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 PSAT1Q9Y617 370 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 WDR81Q562E7 1941 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 LOC100653049A0A140TA62 436 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 KRT34O76011 436 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 MTA2O94776 668 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 AGTP01019 485 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 KDSRQ06136 332 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 POU5F1BQ06416 359 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 PTPRCAPQ14761 206 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 MTFR1Q15390 333 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 OASLQ15646 514 aaKnown RBP9.39□□□□□ -0.91
CKAP2-201ENST00000258607 RFWD3Q6PCD5 774 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 LRIG3Q6UXM1 1119 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 RPS27LQ71UM5 84 aaKnown RBP9.39□□□□□ -0.91
CKAP2-201ENST00000258607 TRMT10CQ7L0Y3 403 aaKnown RBP9.39□□□□□ -0.91
CKAP2-201ENST00000258607 ZNF410Q86VK4 478 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 OR10T2Q8NGX3 314 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 KLHL29Q96CT2 875 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 P2RY11Q96G91 374 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 PRR11Q96HE9 360 aaPredicted RBP9.39□□□□□ -0.91
CKAP2-201ENST00000258607 VCPIP1Q96JH7 1222 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 SERAC1Q96JX3 654 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 AGAP2Q99490 1192 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 SMOQ99835 787 aa9.39□□□□□ -0.91
CKAP2-201ENST00000258607 MTG1Q9BT17 334 aaPredicted RBP9.39□□□□□ -0.91
CKAP2-201ENST00000258607 SHROOM3Q8TF72 1996 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 FAM47DPA6NHR8 397 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 COPEO14579 308 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 PHGDHO43175 533 aaKnown RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 XPOTO43592 962 aaKnown RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 ZMPSTE24O75844 475 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 CD4P01730 458 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 TNFRSF8P28908 595 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 LMNB2Q03252 620 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 CDHR3Q6ZTQ4 885 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 TTC7BQ86TV6 843 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 ZCCHC9Q8N567 271 aaKnown RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 OR6K2Q8NGY2 324 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 PTPRN2Q92932 1015 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 SCYL1Q96KG9 808 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 WDR83Q9BRX9 315 aaKnown RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 BRD8Q9H0E9 1235 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 ABCG8Q9H221 673 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 KLHL14Q9P2G3 628 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 LRFN2Q9ULH4 789 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 GRID1Q9ULK0 1009 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 SMIM35A0A1B0GVV1 85 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 MANSC4A6NHS7 340 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 VAV1P15498 845 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 DRD4P21917 467 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 IL4RP24394 825 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 CRYBB1P53674 252 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 IL9RQ01113 521 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 SP3Q02447 781 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 PTPRRQ15256 657 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 PSMD5Q16401 504 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 CCDC124Q96CT7 223 aaKnown RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 MCRS1Q96EZ8 462 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 CYP4F11Q9HBI6 524 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 PCDH9Q9HC56 1237 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 TRPC7Q9HCX4 862 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms