RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 TBCBQ99426 244 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 LRRC3Q9BY71 257 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 RASAL2Q9UJF2 1139 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 SNX10Q9Y5X0 201 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 USP3Q9Y6I4 520 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 ZNF840PA6NDX5 716 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 MAP3K6O95382 1288 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 PTGIRP43119 386 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 GABRB2P47870 512 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 SULT1E1P49888 294 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 KCTD16Q68DU8 428 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 SCYL2Q6P3W7 929 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 C3orf20Q8ND61 904 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 STK32AQ8WU08 396 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 TRIM11Q96F44 468 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 VCPIP1Q96JH7 1222 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 ZIM3Q96PE6 472 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 CNGB3Q9NQW8 809 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 SCML2Q9UQR0 700 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 GOLGA6L10A0A0M3HER8 536 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 GOLGA6BA6NDN3 693 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 TLR5O60602 858 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 RTN3O95197 1032 aaPredicted RBP12.57□□□□□ -0.4
NIP7-201ENST00000254940 MOCS2O96007 188 aaPredicted RBP12.57□□□□□ -0.4
NIP7-201ENST00000254940 F11P03951 625 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 PTPN2P17706 415 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 PSMA2P25787 234 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 RPL21P46778 160 aaKnown RBP12.57□□□□□ -0.4
NIP7-201ENST00000254940 ZNF268Q14587 947 aaPredicted RBP12.57□□□□□ -0.4
NIP7-201ENST00000254940 SKIDA1Q1XH10 827 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 GPR158Q5T848 1215 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 MFSD7Q6UXD7 560 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 MAATS1Q7Z4T9 603 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 TAC4Q86UU9 113 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 GPR65Q8IYL9 337 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 CCDC26Q8TAB7 109 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 FBXO25Q8TCJ0 367 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 ARL8AQ96BM9 186 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 FBXO44Q9H4M3 255 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 FAM204AQ9H8W3 233 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 SFXN1Q9H9B4 322 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 TRPM5Q9NZQ8 1165 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 CCL26Q9Y258 94 aa12.57□□□□□ -0.4
NIP7-201ENST00000254940 UTP11Q9Y3A2 253 aaKnown RBP12.57□□□□□ -0.4
NIP7-201ENST00000254940 MRPS23Q9Y3D9 190 aaKnown RBP12.57□□□□□ -0.4
NIP7-201ENST00000254940 DENND4CQ5VZ89 1909 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 MYOFQ9NZM1 2061 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 M0QYT0 321 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 COCHO43405 550 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 RNF40O75150 1001 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 PHF2O75151 1096 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 XYLBO75191 536 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 MOSPD3O75425 235 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 LRCH4O75427 683 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 COILP38432 576 aaPredicted RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 RPL34P49207 117 aaKnown RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 DYNLT1P63172 113 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 MMRN1Q13201 1228 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 UAP1Q16222 522 aaPredicted RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 CCDC14Q49A88 953 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 DNAJC21Q5F1R6 531 aaKnown RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 PM20D1Q6GTS8 502 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 ITIH5Q86UX2 942 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 FAM131BQ86XD5 332 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 GLIS1Q8NBF1 620 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 POPDC2Q9HBU9 364 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 TLR8Q9NR97 1041 aaKnown RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 DNAJC17Q9NVM6 304 aaKnown RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 SCINQ9Y6U3 715 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 TMEM265A0A087WTH1 108 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 KCNQ1P51787 676 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 ZXDBP98169 803 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 TERF2Q15554 542 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 OTUD1Q5VV17 481 aaPredicted RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 EMBQ6PCB8 327 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 RHOT1Q8IXI2 618 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 SH2D3CQ8N5H7 860 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 DQX1Q8TE96 717 aaKnown RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 BHMTQ93088 406 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 ERP44Q9BS26 406 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 SLC46A2Q9BY10 475 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 DDIT4Q9NX09 232 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.56□□□□□ -0.4
NIP7-201ENST00000254940 XPO7Q9UIA9 1087 aaKnown RBP12.56□□□□□ -0.4
NIP7-201ENST00000254940 STRIP2Q9ULQ0 834 aa12.56□□□□□ -0.4
NIP7-201ENST00000254940 DOCK8Q8NF50 2099 aa12.55□□□□□ -0.4
NIP7-201ENST00000254940 SIGLEC16A6NMB1 481 aa12.55□□□□□ -0.4
NIP7-201ENST00000254940 TRDMT1O14717 391 aaKnown RBP12.55□□□□□ -0.4
NIP7-201ENST00000254940 CKMP06732 381 aa12.55□□□□□ -0.4
NIP7-201ENST00000254940 MBL2P11226 248 aaPredicted RBP12.55□□□□□ -0.4
NIP7-201ENST00000254940 GPD1P21695 349 aa12.55□□□□□ -0.4
NIP7-201ENST00000254940 TNFRSF8P28908 595 aa12.55□□□□□ -0.4
NIP7-201ENST00000254940 SLC1A1P43005 524 aa12.55□□□□□ -0.4
NIP7-201ENST00000254940 EFHC1Q5JVL4 640 aa12.55□□□□□ -0.4
NIP7-201ENST00000254940 DUPD1Q68J44 220 aa12.55□□□□□ -0.4
NIP7-201ENST00000254940 SLC26A9Q7LBE3 791 aa12.55□□□□□ -0.4
NIP7-201ENST00000254940 MON1AQ86VX9 555 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms