RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 HOXD9P28356 352 aaPredicted RBP23.88■■□□□ 1.41
LSM4-201ENST00000252816 SLC6A4P31645 630 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 CDH5P33151 784 aaPredicted RBP23.88■■□□□ 1.41
LSM4-201ENST00000252816 WASP42768 502 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 JAM2P57087 298 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 GEN1Q17RS7 908 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 MPPE1Q53F39 396 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 FAM133BQ5BKY9 247 aaKnown RBP23.88■■□□□ 1.41
LSM4-201ENST00000252816 LAIR1Q6GTX8 287 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 NADSYN1Q6IA69 706 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 OR6B2Q6IFH4 312 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 RFWD3Q6PCD5 774 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 OLFML1Q6UWY5 402 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 RASSF3Q86WH2 238 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 DHX40Q8IX18 779 aaKnown RBP23.88■■□□□ 1.41
LSM4-201ENST00000252816 MDGA1Q8NFP4 955 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 BPIFA3Q9BQP9 254 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 FUCA2Q9BTY2 467 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 NAT10Q9H0A0 1025 aaKnown RBP23.88■■□□□ 1.41
LSM4-201ENST00000252816 NLRC4Q9NPP4 1024 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 CEP83Q9Y592 693 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 EML5Q05BV3 1969 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 FAM170AA1A519 330 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 ACSL4O60488 711 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 GRAP2O75791 330 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 GFPT2O94808 682 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 TRUB2O95900 331 aaKnown RBP23.87■■□□□ 1.41
LSM4-201ENST00000252816 GLI1P08151 1106 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 SLC11A2P49281 568 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 UBXN1Q04323 297 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 TRMT11Q7Z4G4 463 aaKnown RBP23.87■■□□□ 1.41
LSM4-201ENST00000252816 DEFB106AQ8N104 65 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 FAM160A2Q8N612 972 aaPredicted RBP23.87■■□□□ 1.41
LSM4-201ENST00000252816 TMEM35BQ8NCS4 154 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 EPS8L1Q8TE68 723 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 AZIN2Q96A70 460 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 TMA16Q96EY4 203 aaKnown RBP23.87■■□□□ 1.41
LSM4-201ENST00000252816 SLC2A13Q96QE2 648 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 TPSD1Q9BZJ3 242 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 PDCL3Q9H2J4 239 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 ASNSD1Q9NWL6 643 aa23.87■■□□□ 1.41
LSM4-201ENST00000252816 DCLK1O15075 740 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 IRAK2O43187 625 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 MMEP08473 750 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 NTSR1P30989 418 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 ZNF445P59923 1031 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 EIF4EBP2Q13542 120 aaPredicted RBP23.86■■□□□ 1.41
LSM4-201ENST00000252816 KLHL40Q2TBA0 621 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 DCAF6Q58WW2 860 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 EFHC1Q5JVL4 640 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 PIK3R6Q5UE93 754 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 KBTBD6Q86V97 674 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 SLC20A1Q8WUM9 679 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 SLC2A11Q9BYW1 496 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 XPO7Q9UIA9 1087 aaKnown RBP23.86■■□□□ 1.41
LSM4-201ENST00000252816 NOCTQ9UK39 431 aaKnown RBP23.86■■□□□ 1.41
LSM4-201ENST00000252816 DMXL1Q9Y485 3027 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 SDK1Q7Z5N4 2213 aa23.86■■□□□ 1.41
LSM4-201ENST00000252816 HSF2BPO75031 334 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 SOX5P35711 763 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 SLC6A3Q01959 620 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 ZC3H12AQ5D1E8 599 aaKnown RBP23.85■■□□□ 1.41
LSM4-201ENST00000252816 ANKS1BQ7Z6G8 1248 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 KIAA2013Q8IYS2 634 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 CHPFQ8IZ52 775 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 IPO4Q8TEX9 1081 aaKnown RBP23.85■■□□□ 1.41
LSM4-201ENST00000252816 MYEOVQ96EZ4 313 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 PCMTD1Q96MG8 357 aaPredicted RBP23.85■■□□□ 1.41
LSM4-201ENST00000252816 ERGIC2Q96RQ1 377 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 SYNCQ9H7C4 482 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 POLMQ9NP87 494 aaPredicted RBP23.85■■□□□ 1.41
LSM4-201ENST00000252816 CACNA2D2Q9NY47 1150 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 GMEB2Q9UKD1 530 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 INVSQ9Y283 1065 aa23.85■■□□□ 1.41
LSM4-201ENST00000252816 A0A1W2PQF6 199 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 TCRBV21S2A2A0A5A6 115 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 ALDH1A2O94788 518 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 MOCS2O96007 188 aaPredicted RBP23.84■■□□□ 1.41
LSM4-201ENST00000252816 HOXB2P14652 356 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 TGM1P22735 817 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 SNX16P57768 344 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 TMEM215Q68D42 235 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 RNF43Q68DV7 783 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 SLC26A9Q7LBE3 791 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 CACNA2D4Q7Z3S7 1137 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.84■■□□□ 1.41
LSM4-201ENST00000252816 PRICKLE1Q96MT3 831 aaPredicted RBP23.84■■□□□ 1.41
LSM4-201ENST00000252816 GABRG3Q99928 467 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 NUCKS1Q9H1E3 243 aaKnown RBP23.84■■□□□ 1.41
LSM4-201ENST00000252816 CD248Q9HCU0 757 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 DAAM1Q9Y4D1 1078 aa23.84■■□□□ 1.41
LSM4-201ENST00000252816 WASH3PC4AMC7 463 aa23.83■■□□□ 1.41
LSM4-201ENST00000252816 TBL1XO60907 577 aa23.83■■□□□ 1.41
LSM4-201ENST00000252816 LSM8O95777 96 aaKnown RBP23.83■■□□□ 1.41
LSM4-201ENST00000252816 RETP07949 1114 aa23.83■■□□□ 1.41
LSM4-201ENST00000252816 CHRNB2P17787 502 aa23.83■■□□□ 1.41
LSM4-201ENST00000252816 HLA-FP30511 346 aa23.83■■□□□ 1.41
LSM4-201ENST00000252816 GABRB2P47870 512 aa23.83■■□□□ 1.41
LSM4-201ENST00000252816 ZNF165P49910 485 aa23.83■■□□□ 1.41
LSM4-201ENST00000252816 NOMO3P69849 1222 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms