RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MRPL4Q9BYD3 311 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TBC1D23Q9NUY8 699 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 VTI1BQ9UEU0 232 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TLK1Q9UKI8 766 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ADAM28Q9UKQ2 775 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CHKBQ9Y259 395 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SQORQ9Y6N5 450 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GOLGA8IPA6NC78 632 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GOLGA8JA6NMD2 632 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 APOC4-APOC2K7ER74 178 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PEX1O43933 1283 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 APOC2P02655 101 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CAPNS1P04632 268 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SERPINE1P05121 402 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CYP2C8P10632 490 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SERPINB3P29508 390 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 NEK3P51956 506 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CHN2P52757 468 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GDF10P55107 478 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 STX1BP61266 288 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ARHGAP1Q07960 439 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 UGP2Q16851 508 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ANGEL2Q5VTE6 544 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CASC4Q6P4E1 433 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SAMD7Q7Z3H4 446 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TRIM50Q86XT4 487 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 XYLT1Q86Y38 959 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TMEM192Q8IY95 271 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 FBXO36Q8NEA4 188 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF606Q8WXB4 792 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ADPGKQ9BRR6 497 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 C16orf70Q9BSU1 422 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SEPT9Q9UHD8 586 aaPredicted RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TBC1D30Q9Y2I9 924 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 AP4S1Q9Y587 144 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 DPPA5A6NC42 116 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TRIM49D1C9J1S8 452 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PIK3R2O00459 728 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 XPOTO43592 962 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PEX10O60683 326 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CILPO75339 1184 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CLPTM1O96005 669 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 GH1P01241 217 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 EIF2S1P05198 315 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ATXN3P54252 364 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 BCAR1P56945 870 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 GAD2Q05329 585 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SLC18A2Q05940 514 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TRIP10Q15642 601 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF792Q3KQV3 632 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 LIN52Q52LA3 116 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 RAB6CQ53S08 254 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ACBD5Q5T8D3 534 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 DCAF15Q66K64 600 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SLC9A4Q6AI14 798 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CYS1Q717R9 158 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 DHDDSQ86SQ9 333 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TNIP2Q8NFZ5 429 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 RMDN2Q96LZ7 410 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PWWP2AQ96N64 755 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CALN1Q9BXU9 219 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 RAB6CQ9H0N0 254 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 POLR3FQ9H1D9 316 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CYP3A43Q9HB55 503 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 RABGEF1Q9UJ41 708 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 RAB26Q9ULW5 256 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SCAF8Q9UPN6 1271 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SHROOM3Q8TF72 1996 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 LRRIQ4A6NIV6 560 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 FOXO6A8MYZ6 492 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 RBP3P10745 1247 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 UQCRBP14927 111 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 GM2AP17900 193 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 RPA3P35244 121 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SPRP35270 261 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SLC12A2P55011 1212 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PSMC1P62191 440 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TUBB3Q13509 450 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF699Q32M78 642 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ANO7Q6IWH7 933 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 GSDMBQ8TAX9 411 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ITFG2Q969R8 447 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SLC7A5P2Q9GIP4 190 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 DENND2DQ9H6A0 471 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ACAD9Q9H845 621 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 FZD1Q9UP38 647 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CEP350Q5VT06 3117 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CST8O60676 142 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PIM1P11309 404 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 NR1H2P55055 460 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 DCTN2Q13561 401 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 NCOA4Q13772 614 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CHI3L2Q15782 390 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CCDC92Q53HC0 331 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ARID3BQ8IVW6 561 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PQLC3Q8N755 202 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 C1orf127Q8N9H9 656 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 DTX3LQ8TDB6 740 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms