RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 SLC45A4Q5BKX6 768 aa17.87■□□□□ 0.45
PCCB-201ENST00000251654 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
PCCB-201ENST00000251654 FBXO22Q8NEZ5 403 aa17.87■□□□□ 0.45
PCCB-201ENST00000251654 GPR152Q8TDT2 470 aa17.87■□□□□ 0.45
PCCB-201ENST00000251654 C2orf15Q8WU43 125 aaKnown RBP17.87■□□□□ 0.45
PCCB-201ENST00000251654 CASP10Q92851 521 aa17.87■□□□□ 0.45
PCCB-201ENST00000251654 QKIQ96PU8 341 aaKnown RBP eCLIP17.87■□□□□ 0.458e-7■■■□□ 15.7
PCCB-201ENST00000251654 SLC27A5Q9Y2P5 690 aa17.87■□□□□ 0.45
PCCB-201ENST00000251654 WDR27A2RRH5 827 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 NDC80O14777 642 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 DCLK1O15075 740 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 KCNN4O15554 427 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 HAPLN1P10915 354 aaPredicted RBP17.86■□□□□ 0.45
PCCB-201ENST00000251654 RAG1P15918 1043 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 HCAR3P49019 387 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 EIF3BP55884 814 aaKnown RBP17.86■□□□□ 0.45
PCCB-201ENST00000251654 DENND5BQ6ZUT9 1274 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 PCGF5Q86SE9 256 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 PPIL6Q8IXY8 311 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 NAT8LQ8N9F0 302 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 LRRN4Q8WUT4 740 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 RBM15Q96T37 977 aaKnown RBP eCLIP17.86■□□□□ 0.454e-6■■□□□ 13.6
PCCB-201ENST00000251654 KIAA1671Q9BY89 1806 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.86■□□□□ 0.45
PCCB-201ENST00000251654 MSI1O43347 362 aaKnown RBP17.86■□□□□ 0.45
PCCB-201ENST00000251654 DUSP4Q13115 394 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 PAFAH1B3Q15102 231 aaKnown RBP17.86■□□□□ 0.45
PCCB-201ENST00000251654 PSMD5Q16401 504 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 MGAT5BQ3V5L5 792 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 ANKRD22Q5VYY1 191 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 FAM117BQ6P1L5 589 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 HOOK3Q86VS8 718 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 CDKL3Q8IVW4 592 aaPredicted RBP17.86■□□□□ 0.45
PCCB-201ENST00000251654 CCDC33Q8N5R6 958 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 SPATA17Q96L03 361 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 SEPT5Q99719 369 aaPredicted RBP17.86■□□□□ 0.45
PCCB-201ENST00000251654 TMBIM4Q9HC24 238 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 ARHGEF38Q9NXL2 777 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 OR12D3Q9UGF7 316 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 SFMBT1Q9UHJ3 866 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 BACE2Q9Y5Z0 518 aa17.86■□□□□ 0.45
PCCB-201ENST00000251654 GOLGA6CA6NDK9 693 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 EFCAB14O75071 495 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 TTC4O95801 387 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 MYZAPP0CAP1 466 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 GOLGA6DP0CG33 693 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 ACRP10323 421 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 RPL17P18621 184 aaKnown RBP17.85■□□□□ 0.45
PCCB-201ENST00000251654 TPI1P60174 286 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 FAM182AQ5T1J6 154 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 MSANTD2Q6P1R3 559 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 SLC39A11Q8N1S5 342 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 GOLGA6AQ9NYA3 693 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 GMIPQ9P107 970 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 NUDT5Q9UKK9 219 aa17.85■□□□□ 0.45
PCCB-201ENST00000251654 TMEM63AO94886 807 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 ERCC2P18074 760 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 ATF6P18850 670 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 YWHAQP27348 245 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 ZNF135P52742 658 aaPredicted RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 GAD2Q05329 585 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 BRMS1LQ5PSV4 323 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 CMTR2Q8IYT2 770 aaKnown RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 ARHGAP18Q8N392 663 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 TMEM199Q8N511 208 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 TAB3Q8N5C8 712 aaPredicted RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 ZNF558Q96NG5 402 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 NINJ2Q9NZG7 142 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 ADAM21Q9UKJ8 722 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 NEU3Q9UQ49 428 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 SNX10Q9Y5X0 201 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 MRPL42Q9Y6G3 142 aaKnown RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 ALPK3Q96L96 1907 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 TCRBV7S3A2A0A539 114 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 LRIG2O94898 1065 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 RTN3O95197 1032 aaPredicted RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 ACSL3O95573 720 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 SOD2P04179 222 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 CCR1P32246 355 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 OR1D2P34982 312 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 BASP1P80723 227 aaKnown RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 GABPB1Q06547 395 aaPredicted RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 IFFO1Q0D2I5 559 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 BTG3Q14201 252 aaPredicted RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 PPP2R5DQ14738 602 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 PRKD1Q15139 912 aaPredicted RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 KYNUQ16719 465 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 KCTD16Q68DU8 428 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 CEP128Q6ZU80 1094 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 BZW1Q7L1Q6 419 aaKnown RBP17.84■□□□□ 0.45
PCCB-201ENST00000251654 RNF34Q969K3 372 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 ATP6V1G3Q96LB4 118 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 LGMNQ99538 433 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 EPAS1Q99814 870 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 TMEM106CQ9BVX2 250 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 OSBPL2Q9H1P3 480 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 PAK5Q9P286 719 aa17.84■□□□□ 0.45
PCCB-201ENST00000251654 GOLGA6L10A6NI86 522 aa17.83■□□□□ 0.44
PCCB-201ENST00000251654 HACD1B0YJ81 288 aa17.83■□□□□ 0.44
PCCB-201ENST00000251654 BAIAP3O94812 1187 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms