RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 P2RY11Q96G91 374 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 KCNK16Q96T55 309 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 KLF16Q9BXK1 252 aaPredicted RBP12.6□□□□□ -0.39
RFPL3-201ENST00000249007 CIPCQ9C0C6 399 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 PDE11AQ9HCR9 933 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 GDF3Q9NR23 364 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 ELOVL2Q9NXB9 296 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 IGHV4-34P06331 123 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 NASPP49321 788 aaPredicted RBP12.59□□□□□ -0.39
RFPL3-201ENST00000249007 E2F1Q01094 437 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 CAMK2GQ13555 558 aaPredicted RBP12.59□□□□□ -0.39
RFPL3-201ENST00000249007 SFMBT2Q5VUG0 894 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 ANKS1BQ7Z6G8 1248 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 CCDC83Q8IWF9 413 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 OR6B3Q8NGW1 331 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 SORCS1Q8WY21 1168 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 MRPL45Q9BRJ2 306 aaKnown RBP12.59□□□□□ -0.39
RFPL3-201ENST00000249007 B3GNT5Q9BYG0 378 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 DPEP3Q9H4B8 488 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 ST6GALNAC4Q9H4F1 302 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 THSD1Q9NS62 852 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 CCDC39Q9UFE4 941 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 SSUH2Q9Y2M2 353 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 NME7Q9Y5B8 376 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 PLXNA2O75051 1894 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 A0A1W2PPC4 97 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 PENKP01210 267 aaPredicted RBP12.59□□□□□ -0.39
RFPL3-201ENST00000249007 ACP1P24666 158 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 LSSP48449 732 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 PGFP49763 221 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 ZNF445P59923 1031 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 ARID5AQ03989 594 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 TTC31Q49AM3 519 aaPredicted RBP12.59□□□□□ -0.39
RFPL3-201ENST00000249007 KIAA0895LQ68EN5 471 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 FBXO18Q8NFZ0 1043 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 ANKRD36BP1Q96IX9 119 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 VCPIP1Q96JH7 1222 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 POLR1BQ9H9Y6 1135 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 SGK2Q9HBY8 427 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 AASDHPPTQ9NRN7 309 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 GEMIN8Q9NWZ8 242 aaKnown RBP12.59□□□□□ -0.39
RFPL3-201ENST00000249007 IL37Q9NZH6 218 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 KIF3AQ9Y496 699 aa12.59□□□□□ -0.39
RFPL3-201ENST00000249007 FAM47DPA6NHR8 397 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 USP12O75317 370 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 LDHAP00338 332 aaKnown RBP12.58□□□□□ -0.4
RFPL3-201ENST00000249007 DNTTP04053 509 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 WNT1P04628 370 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 DDIT3P35638 169 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 ATP5C1P36542 298 aaKnown RBP12.58□□□□□ -0.4
RFPL3-201ENST00000249007 NFKB2Q00653 900 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 ZBTB16Q05516 673 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 SYCP1Q15431 976 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 FYB2Q5VWT5 728 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 CCDC81Q6ZN84 652 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 Q6ZNB5 142 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 EXD3Q8N9H8 876 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 NOC3LQ8WTT2 800 aaKnown RBP12.58□□□□□ -0.4
RFPL3-201ENST00000249007 HVCN1Q96D96 273 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 PIWIL1Q96J94 861 aaKnown RBP12.58□□□□□ -0.4
RFPL3-201ENST00000249007 DMAP1Q9NPF5 467 aaPredicted RBP12.58□□□□□ -0.4
RFPL3-201ENST00000249007 ASCL3Q9NQ33 180 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 TLR8Q9NR97 1041 aaKnown RBP12.58□□□□□ -0.4
RFPL3-201ENST00000249007 INTS13Q9NVM9 706 aa12.58□□□□□ -0.4
RFPL3-201ENST00000249007 C2CD3Q4AC94 2353 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 GOLGA8IPA6NC78 632 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 VWA3AA6NCI4 1184 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 GOLGA8JA6NMD2 632 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 GOLGA6L22H0YM25 854 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 SUV39H1O43463 412 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 TACC1O75410 805 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 TNNC2P02585 160 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 AFPP02771 609 aaKnown RBP12.57□□□□□ -0.4
RFPL3-201ENST00000249007 C7P10643 843 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 MYF5P13349 255 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 CD38P28907 300 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 KCNA1Q09470 495 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 BNIP3Q12983 259 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 UBAP2LQ14157 1087 aaKnown RBP12.57□□□□□ -0.4
RFPL3-201ENST00000249007 ZNF720Q7Z2F6 126 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 ZNF366Q8N895 744 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 RBBP8NLQ8NC74 664 aaPredicted RBP12.57□□□□□ -0.4
RFPL3-201ENST00000249007 OR5B17Q8NGF7 314 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 DEPDC7Q96QD5 511 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 FBRSQ9HAH7 460 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 STARD5Q9NSY2 213 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 COMMD8Q9NX08 183 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 SEPT3Q9UH03 358 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 EXOC7Q9UPT5 735 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 ATP8B3O60423 1300 aa12.57□□□□□ -0.4
RFPL3-201ENST00000249007 A8MXQ7 604 aa12.56□□□□□ -0.4
RFPL3-201ENST00000249007 TIMM44O43615 452 aa12.56□□□□□ -0.4
RFPL3-201ENST00000249007 RPS14P62263 151 aaKnown RBP12.56□□□□□ -0.4
RFPL3-201ENST00000249007 ST3GAL1Q11201 340 aa12.56□□□□□ -0.4
RFPL3-201ENST00000249007 PROX2Q3B8N5 592 aa12.56□□□□□ -0.4
RFPL3-201ENST00000249007 FNDC3BQ53EP0 1204 aaKnown RBP12.56□□□□□ -0.4
RFPL3-201ENST00000249007 C4orf17Q53FE4 359 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms