RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 RTP4Q96DX8 246 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 C8orf48Q96LL4 319 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 OLFM3Q96PB7 478 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 TTPALQ9BTX7 342 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 TSPYL1Q9H0U9 437 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 ABCC13Q9NSE7 274 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 RRN3Q9NYV6 651 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 NOVA2Q9UNW9 492 aaKnown RBP13.88□□□□□ -0.19
NUP85-201ENST00000245544 SHOC2Q9UQ13 582 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 NUP205Q92621 2012 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 OR6C75A6NL08 312 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 H3BRJ5 948 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 PARNO95453 639 aaKnown RBP13.88□□□□□ -0.19
NUP85-201ENST00000245544 F9P00740 461 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 CSF2RAP15509 400 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 NR2C2P49116 596 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 ATP1A2P50993 1020 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 DEFB103AP81534 67 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 LONRF1Q17RB8 773 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 SLC45A4Q5BKX6 768 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 BTBD8Q5XKL5 378 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 CCDC13Q8IYE1 715 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 EXOC4Q96A65 974 aa13.88□□□□□ -0.19
NUP85-201ENST00000245544 WDR83Q9BRX9 315 aaKnown RBP13.88□□□□□ -0.19
NUP85-201ENST00000245544 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.88□□□□□ -0.19
NUP85-201ENST00000245544 MYO18AQ92614 2054 aaKnown RBP13.88□□□□□ -0.19
NUP85-201ENST00000245544 DCLK1O15075 740 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 EFEMP2O95967 443 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 ERCC2P18074 760 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 HPDP32754 393 aaPredicted RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 ALDH7A1P49419 539 aaKnown RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 PDIA2Q13087 525 aaKnown RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 DUSP4Q13115 394 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 GPR17Q13304 367 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 TTC19Q6DKK2 380 aaPredicted RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 RELL1Q8IUW5 271 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 ANKMY2Q8IV38 441 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 DNAJC5GQ8N7S2 189 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 RNF34Q969K3 372 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 ARMC5Q96C12 935 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 QKIQ96PU8 341 aaKnown RBP eCLIP13.87□□□□□ -0.19
NUP85-201ENST00000245544 SEPT5Q99719 369 aaPredicted RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 C11orf49Q9H6J7 331 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 PRDM5Q9NQX1 630 aaPredicted RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 RAB6BQ9NRW1 208 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 GMIPQ9P107 970 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 OR12D3Q9UGF7 316 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 XPO7Q9UIA9 1087 aaKnown RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 SCML2Q9UQR0 700 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 CDY1Q9Y6F8 540 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 MRPL42Q9Y6G3 142 aaKnown RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 HMGB1P1B2RPK0 211 aaPredicted RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 IRAK2O43187 625 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 ACRP10323 421 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 LMAN1P49257 510 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 AIF1P55008 147 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 XRCC4Q13426 336 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 KCNJ11Q14654 390 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 MGAT5BQ3V5L5 792 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 CAPN12Q6ZSI9 719 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 PCGF5Q86SE9 256 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 ZBED8Q8IZ13 594 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 NPWQ8N729 165 aa13.87□□□□□ -0.19
NUP85-201ENST00000245544 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.87□□□□□ -0.19
NUP85-201ENST00000245544 WDR27A2RRH5 827 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 CFAP69A5D8W1 941 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 C2CD2LO14523 706 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 TRIM66O15016 1216 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 LRIG2O94898 1065 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 METTL18O95568 372 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 MAGEA11P43364 429 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 TPI1P60174 286 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 MAGOHP61326 146 aaKnown RBP13.86□□□□□ -0.19
NUP85-201ENST00000245544 IFI35P80217 286 aaPredicted RBP13.86□□□□□ -0.19
NUP85-201ENST00000245544 PAFAH1B3Q15102 231 aaKnown RBP13.86□□□□□ -0.19
NUP85-201ENST00000245544 ARL13BQ3SXY8 428 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 BEND5Q7L4P6 421 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 CDKL3Q8IVW4 592 aaPredicted RBP13.86□□□□□ -0.19
NUP85-201ENST00000245544 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 TOP1MTQ969P6 601 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 CEP41Q9BYV8 373 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 FOXP3Q9BZS1 431 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 SMOC2Q9H3U7 446 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 CTNNAL1Q9UBT7 734 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 PLXNA3P51805 1871 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 GREB1Q4ZG55 1949 aa13.86□□□□□ -0.19
NUP85-201ENST00000245544 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.85□□□□□ -0.19
NUP85-201ENST00000245544 FOXO6A8MYZ6 492 aa13.85□□□□□ -0.19
NUP85-201ENST00000245544 F5H423 210 aaPredicted RBP13.85□□□□□ -0.19
NUP85-201ENST00000245544 ALOX15BO15296 676 aa13.85□□□□□ -0.19
NUP85-201ENST00000245544 TBX18O95935 607 aa13.85□□□□□ -0.19
NUP85-201ENST00000245544 HSPA8P11142 646 aaKnown RBP13.85□□□□□ -0.19
NUP85-201ENST00000245544 NR1D1P20393 614 aa13.85□□□□□ -0.19
NUP85-201ENST00000245544 ELAVL2Q12926 359 aaKnown RBP13.85□□□□□ -0.19
NUP85-201ENST00000245544 AUHQ13825 339 aaKnown RBP13.85□□□□□ -0.19
NUP85-201ENST00000245544 HIF1AQ16665 826 aa13.85□□□□□ -0.19
NUP85-201ENST00000245544 ARTNQ5T4W7 220 aa13.85□□□□□ -0.19
NUP85-201ENST00000245544 AGBL2Q5U5Z8 902 aa13.85□□□□□ -0.19
NUP85-201ENST00000245544 ANKS3Q6ZW76 656 aa13.85□□□□□ -0.19
NUP85-201ENST00000245544 HOOK3Q86VS8 718 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms