RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 NR2E1Q9Y466 385 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 FAM169AQ9Y6X4 670 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 CCDC169A6NNP5 214 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 ANKRD63C9JTQ0 380 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 ZNF561-AS1K7EIQ3 104 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 ADAMTS4O75173 837 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 STBD1O95210 358 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 MYCLP12524 364 aaPredicted RBP8.31□□□□□ -1.08
CXCR4-201ENST00000241393 KCNA2P16389 499 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 MAN1A1P33908 653 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 TRHRP34981 398 aaPredicted RBP8.31□□□□□ -1.08
CXCR4-201ENST00000241393 SLC1A1P43005 524 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 KPNA1P52294 538 aaPredicted RBP8.31□□□□□ -1.08
CXCR4-201ENST00000241393 RWDD2BP57060 319 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 MAP2K1Q02750 393 aaPredicted RBP8.31□□□□□ -1.08
CXCR4-201ENST00000241393 BYSLQ13895 437 aaKnown RBP8.31□□□□□ -1.08
CXCR4-201ENST00000241393 SLMAPQ14BN4 828 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 C15orf39Q6ZRI6 1047 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 SYDE1Q6ZW31 735 aaPredicted RBP8.31□□□□□ -1.08
CXCR4-201ENST00000241393 SLC13A5Q86YT5 568 aaPredicted RBP8.31□□□□□ -1.08
CXCR4-201ENST00000241393 REPS2Q8NFH8 660 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 MYCBPAPQ8TBZ2 947 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 NSUN6Q8TEA1 469 aaKnown RBP8.31□□□□□ -1.08
CXCR4-201ENST00000241393 JDP2Q8WYK2 163 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 KRT35Q92764 455 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 SEMA4DQ92854 862 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 KAT5Q92993 513 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 MAGOHBQ96A72 148 aaKnown RBP8.31□□□□□ -1.08
CXCR4-201ENST00000241393 CENPTQ96BT3 561 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 TLCD1Q96CP7 247 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 CEP170P1Q96L14 293 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 IFT74Q96LB3 600 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 TRIM51Q9BSJ1 452 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 NUP85Q9BW27 656 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 RNF32Q9H0A6 362 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 DPH5Q9H2P9 285 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 LRRC19Q9H756 370 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 SP110Q9HB58 689 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 ERVK-5Q9HDB9 667 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 HOMER2Q9NSB8 354 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 TMOD4Q9NZQ9 345 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 ARHGAP28Q9P2N2 729 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 ZNF112Q9UJU3 913 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 CBLCQ9ULV8 474 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 ADAMTS5Q9UNA0 930 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 PCDHB4Q9Y5E5 795 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 STYXL1Q9Y6J8 313 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 FER1L6Q2WGJ9 1857 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 MYPNQ86TC9 1320 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 PASKQ96RG2 1323 aa8.31□□□□□ -1.08
CXCR4-201ENST00000241393 C19orf81C9J6K1 198 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 SPOPO43791 374 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 KIAA0754O94854 1291 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 PIGRP01833 764 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 MMEP08473 750 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 DBHP09172 617 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 USP8P40818 1118 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 LSSP48449 732 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 PMS2P54278 862 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 BACE1P56817 501 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 TGFB2P61812 414 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 IFFO1Q0D2I5 559 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 PTP4A2Q12974 167 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 DRP2Q13474 957 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 BAATQ14032 418 aaPredicted RBP8.3□□□□□ -1.08
CXCR4-201ENST00000241393 MESDQ14696 234 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 KCNMB1Q16558 191 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 KRT71Q3SY84 523 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 NAA35Q5VZE5 725 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 PLA2G4FQ68DD2 849 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 SLC39A4Q6P5W5 647 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 ZDHHC24Q6UX98 284 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 TRIM72Q6ZMU5 477 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 NECAB2Q7Z6G3 386 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 SLC47A2Q86VL8 602 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 NLRP14Q86W24 1093 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 OSTM1Q86WC4 334 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 SCYL3Q8IZE3 742 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 ZNF473Q8WTR7 871 aaKnown RBP8.3□□□□□ -1.08
CXCR4-201ENST00000241393 POMGNT1Q8WZA1 660 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 ZNF653Q96CK0 615 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 CCT8L2Q96SF2 557 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 STMN4Q9H169 189 aaPredicted RBP8.3□□□□□ -1.08
CXCR4-201ENST00000241393 ATP6V0A4Q9HBG4 840 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 GRHL1Q9NZI5 618 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 MYOTQ9UBF9 498 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 GABBR1Q9UBS5 961 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 RGS17Q9UGC6 210 aaPredicted RBP8.3□□□□□ -1.08
CXCR4-201ENST00000241393 SRPK3Q9UPE1 567 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 PCDHB2Q9Y5E7 798 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 ATP23Q9Y6H3 246 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 PARP14Q460N5 1801 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 DOCK1Q14185 1865 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 GOLGA8IPA6NC78 632 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 GMNCA6NCL1 334 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 C5orf60A6NFR6 353 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 GOLGA8JA6NMD2 632 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 TRAPPC3O43617 180 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 EXTL3O43909 919 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 COL6A2P12110 1019 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms