RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 LSMEM2Q8N112 164 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 SNX19Q92543 992 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 ZNF516Q92618 1163 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 HPS3Q969F9 1004 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 SYAP1Q96A49 352 aaPredicted RBP8.77□□□□□ -1.01
IFT43-201ENST00000238628 SMARCD1Q96GM5 515 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 TNIP3Q96KP6 325 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 CGRRF1Q99675 332 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 FBXO44Q9H4M3 255 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 DMAP1Q9NPF5 467 aaPredicted RBP8.77□□□□□ -1.01
IFT43-201ENST00000238628 MARK1Q9P0L2 795 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.77□□□□□ -1.01
IFT43-201ENST00000238628 STON1Q9Y6Q2 735 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 TMEM131Q92545 1883 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 NBASA2RRP1 2371 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 KCNJ18B7U540 433 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 CLIC2O15247 247 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 GREM1O60565 184 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 BEST1O76090 585 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 HOXD13P35453 343 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 PLA2G4AP47712 749 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 PGFP49763 221 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 CEBPZQ03701 1054 aaKnown RBP8.76□□□□□ -1.01
IFT43-201ENST00000238628 CYP24A1Q07973 514 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 LINC00303Q3SY05 128 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 FUT11Q495W5 492 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 ACOT1Q86TX2 421 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 GATAD2AQ86YP4 633 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 TMPRSS6Q8IU80 811 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 FUKQ8N0W3 1084 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 CACTIN-AS1Q8N1I8 211 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 PDILTQ8N807 584 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 XXYLT1Q8NBI6 393 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 ZMIZ2Q8NF64 920 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 ZNF507Q8TCN5 953 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 UCMAQ8WVF2 138 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 BHMTQ93088 406 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 SIPA1Q96FS4 1042 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 SMOQ99835 787 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 TRIM9Q9C026 710 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 LRRC27Q9C0I9 530 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 MKRN2Q9H000 416 aaKnown RBP8.76□□□□□ -1.01
IFT43-201ENST00000238628 PLK2Q9NYY3 685 aa8.76□□□□□ -1.01
IFT43-201ENST00000238628 PLEKHB1Q9UF11 243 aaPredicted RBP8.76□□□□□ -1.01
IFT43-201ENST00000238628 A0A087X0B3 334 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 CLEC18AA5D8T8 446 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 VPS37CA5D8V6 355 aaPredicted RBP8.75□□□□□ -1.01
IFT43-201ENST00000238628 NPC1O15118 1278 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 EIF3DO15371 548 aaKnown RBP eCLIP8.75□□□□□ -1.01
IFT43-201ENST00000238628 TGFB1I1O43294 461 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 SYNCRIPO60506 623 aaKnown RBP8.75□□□□□ -1.01
IFT43-201ENST00000238628 CD2BP2O95400 341 aaKnown RBP8.75□□□□□ -1.01
IFT43-201ENST00000238628 ITGAVP06756 1048 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 ACADMP11310 421 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 SFTPCP11686 197 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 ITGB6P18564 788 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 ACO1P21399 889 aaKnown RBP8.75□□□□□ -1.01
IFT43-201ENST00000238628 ELAVL4P26378 380 aaKnown RBP8.75□□□□□ -1.01
IFT43-201ENST00000238628 AFMP43652 599 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 TPMTP51580 245 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 CYP2J2P51589 502 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 ZNF132P52740 706 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 MAP3K7CLP57077 242 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 ERVPABLB-1P60509 514 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 GABREP78334 506 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 BIRC3Q13489 604 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 ZNF667Q5HYK9 610 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 CLEC18BQ6UXF7 455 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 EID2Q8N6I1 236 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 DCBLD1Q8N8Z6 715 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 CLEC18CQ8NCF0 446 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 C1orf216Q8TAB5 229 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 PRCCQ92733 491 aaPredicted RBP8.75□□□□□ -1.01
IFT43-201ENST00000238628 NUP58Q9BVL2 599 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 XYLT2Q9H1B5 865 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 SMYD3Q9H7B4 428 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 CYLDQ9NQC7 956 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 AGPAT3Q9NRZ7 376 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 KRT82Q9NSB4 513 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 WDR70Q9NW82 654 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 USP36Q9P275 1121 aaKnown RBP8.75□□□□□ -1.01
IFT43-201ENST00000238628 THAP10Q9P2Z0 257 aaPredicted RBP8.75□□□□□ -1.01
IFT43-201ENST00000238628 FBXO10Q9UK96 956 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 NUDT5Q9UKK9 219 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 FBN2P35556 2912 aa8.75□□□□□ -1.01
IFT43-201ENST00000238628 POLQO75417 2590 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 NUMA1Q14980 2115 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 MDM4O15151 490 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 PAPSS1O43252 624 aaPredicted RBP8.74□□□□□ -1.01
IFT43-201ENST00000238628 DFNA5O60443 496 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 MT-CO3P00414 261 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 RARGP13631 454 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 CCDC130P13994 396 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 ABCB4P21439 1286 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 CHKAP35790 457 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 GRIA4P48058 902 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 MFAP3P55082 362 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 INHBCP55103 352 aa8.74□□□□□ -1.01
IFT43-201ENST00000238628 SNRPFP62306 86 aaKnown RBP8.74□□□□□ -1.01
IFT43-201ENST00000238628 INSM1Q01101 510 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms