RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 NEK3P51956 506 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 MRPS22P82650 360 aaKnown RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 FAM98CQ17RN3 349 aaKnown RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 CENPIQ92674 756 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 APOL5Q9BWW9 433 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 COPS7BQ9H9Q2 264 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 CHST12Q9NRB3 414 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 SNX9Q9Y5X1 595 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 USP31Q70CQ4 1352 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 HS6ST1O60243 411 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 CD151P48509 253 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 FOLH1Q04609 750 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 MCOLN2Q8IZK6 566 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 PROX1Q92786 737 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 GPRC5DQ9NZD1 345 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 WBP11Q9Y2W2 641 aaKnown RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 ROBO2Q9HCK4 1378 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 CAMSAP1Q5T5Y3 1602 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ACLYP53396 1101 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 IER5Q5VY09 327 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ITFG1Q8TB96 612 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 RAPGEFL1Q9UHV5 662 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 HACD1B0YJ81 288 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 SGPL1O95470 568 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ELK3P41970 407 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 GCNT1Q02742 428 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 TYSND1Q2T9J0 566 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 Q3C1V9 767 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 SGO1Q5FBB7 561 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 EEPD1Q7L9B9 569 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 SYTL1Q8IYJ3 562 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 SAMD3Q8N6K7 520 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 COX4I2Q96KJ9 171 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 TMEM121Q9BTD3 319 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 RUSC1Q9BVN2 902 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ERI2A8K979 691 aaKnown RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 RARAP10276 462 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 C2CD6Q53TS8 623 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 PRR23BQ6ZRT6 265 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 ADPRHL2Q9NX46 363 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 MAP3K20Q9NYL2 800 aaKnown RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 ITM2BQ9Y287 266 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 E2F8A0AVK6 867 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 AKAP5P24588 427 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 LRPAP1P30533 357 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 CASP5P51878 434 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 ZNF135P52742 658 aaPredicted RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 FBXW4P57775 412 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 TNK2Q07912 1038 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 VEPH1Q14D04 833 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 BICRALQ6AI39 1079 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 SKA1Q96BD8 255 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 FAM84BQ96KN1 310 aaPredicted RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 SPAG4Q9NPE6 437 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 SPASTQ9UBP0 616 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 PSMD13Q9UNM6 376 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 GSTK1Q9Y2Q3 226 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 UNC13BO14795 1591 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 KRT36O76013 467 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 RGS7P49802 495 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 AMPD2Q01433 879 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 USP39Q53GS9 565 aaKnown RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 BNIPLQ7Z465 357 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 IQCKQ8N0W5 287 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 RP9Q8TA86 221 aaKnown RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 HPDLQ96IR7 371 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 RGSL1A5PLK6 1076 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 CHADO15335 359 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 ADRA2BP18089 450 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 FAM228AQ86W67 206 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 POU5F2Q8N7G0 328 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 ETNPPLQ8TBG4 499 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 OTUD5Q96G74 571 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 NARS2Q96I59 477 aaKnown RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 VPS45Q9NRW7 570 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 CARD8Q9Y2G2 431 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 RIPPLY1Q0D2K3 151 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 MKRN4PQ13434 485 aaPredicted RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 GOLGA7BQ2TAP0 167 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 DCAF4L1Q3SXM0 396 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 FOXR2Q6PJQ5 311 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 MUC13Q9H3R2 512 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 POLR1BQ9H9Y6 1135 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 OSGEPQ9NPF4 335 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 CCNHP51946 323 aaPredicted RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 PMF1Q6P1K2 205 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 FIG4Q92562 907 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 Q96MT0 163 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 SMARCAD1Q9H4L7 1026 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 AP4B1Q9Y6B7 739 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 TTC7BQ86TV6 843 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 CCDC36Q8IYA8 594 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 PIGUQ9H490 435 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 PGM3O95394 542 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 VDRP11473 427 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 RRM1P23921 792 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 GNL1P36915 607 aaPredicted RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 SPATA2LQ8IUW3 424 aaPredicted RBP8.41□□□□□ -1.06
APOB-201ENST00000233242 TTC30BQ8N4P2 665 aa8.41□□□□□ -1.06
APOB-201ENST00000233242 GRPEL2Q8TAA5 225 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms