RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 CORO1AP31146 461 aaKnown RBP12.14□□□□□ -0.47
FRG1-201ENST00000226798 AFF3P51826 1226 aaKnown RBP12.14□□□□□ -0.47
FRG1-201ENST00000226798 CAMK2BQ13554 666 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 CUL4BQ13620 913 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 E2F5Q15329 346 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 TMEM215Q68D42 235 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 SV2AQ7L0J3 742 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 CACUL1Q86Y37 369 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 FAM217AQ8IXS0 508 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 CPXM2Q8N436 756 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 KIAA0895Q8NCT3 520 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 TMC2Q8TDI7 906 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 UCMAQ8WVF2 138 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 HNRNPLLQ8WVV9 542 aaKnown RBP12.14□□□□□ -0.47
FRG1-201ENST00000226798 INTS4Q96HW7 963 aaKnown RBP12.14□□□□□ -0.47
FRG1-201ENST00000226798 CDK5RAP1Q96SZ6 601 aaKnown RBP12.14□□□□□ -0.47
FRG1-201ENST00000226798 DCLK3Q9C098 648 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 KCTD10Q9H3F6 313 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 ELOVL2Q9NXB9 296 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 AGO1Q9UL18 857 aaKnown RBP12.14□□□□□ -0.47
FRG1-201ENST00000226798 CLEC4EQ9ULY5 219 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 BTBD3Q9Y2F9 522 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 ZNF462Q96JM2 2506 aa12.14□□□□□ -0.47
FRG1-201ENST00000226798 NYNRINQ9P2P1 1898 aaKnown RBP12.13□□□□□ -0.47
FRG1-201ENST00000226798 IKBKBO14920 756 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 KLRC4O43908 158 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 RALAP11233 206 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 TRIM21P19474 475 aaKnown RBP12.13□□□□□ -0.47
FRG1-201ENST00000226798 PIK3CAP42336 1068 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 COG7P83436 770 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 CAMK2GQ13555 558 aaPredicted RBP12.13□□□□□ -0.47
FRG1-201ENST00000226798 PTPRNQ16849 979 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 KIF19Q2TAC6 998 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 MARCH9Q86YJ5 346 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 GALNT15Q8N3T1 639 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 RHBDD1Q8TEB9 315 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 SORCS1Q8WY21 1168 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 LRIG1Q96JA1 1093 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 NT5C1AQ9BXI3 368 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 DUSP16Q9BY84 665 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 SLC2A11Q9BYW1 496 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 CYP3A43Q9HB55 503 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 APOBEC3GQ9HC16 384 aaKnown RBP12.13□□□□□ -0.47
FRG1-201ENST00000226798 OSGEPQ9NPF4 335 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 RASAL2Q9UJF2 1139 aa12.13□□□□□ -0.47
FRG1-201ENST00000226798 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.13□□□□□ -0.47
FRG1-201ENST00000226798 A0A087WV48 116 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 NR3C1P04150 777 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 EPHX1P07099 455 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 ACADMP11310 421 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 ACSL1P33121 698 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 GRIA4P48058 902 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 CSNK1EP49674 416 aaKnown RBP12.12□□□□□ -0.47
FRG1-201ENST00000226798 EFEMP1Q12805 493 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 STK4Q13043 487 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 SMAD1Q15797 465 aaKnown RBP12.12□□□□□ -0.47
FRG1-201ENST00000226798 SERPINA13PQ6UXR4 307 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 FAM124AQ86V42 546 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 DENND1CQ8IV53 801 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 SCUBE3Q8IX30 993 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 OR2T3Q8NH03 318 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 CIPCQ9C0C6 399 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 TMEM245Q9H330 911 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 C6orf106Q9H6K1 298 aaPredicted RBP12.12□□□□□ -0.47
FRG1-201ENST00000226798 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
FRG1-201ENST00000226798 SNX11Q9Y5W9 270 aa12.12□□□□□ -0.47
FRG1-201ENST00000226798 SHROOM3Q8TF72 1996 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 TRABD2BA6NFA1 517 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 PDXKO00764 312 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 TNFSF14O43557 240 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 TIMM44O43615 452 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 PCDHGA12O60330 932 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 CYBBP04839 570 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 HMBSP08397 361 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 HLA-EP13747 358 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 HOXD9P28356 352 aaPredicted RBP12.11□□□□□ -0.47
FRG1-201ENST00000226798 GRK6P43250 576 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 AFMP43652 599 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 CYP4F3Q08477 520 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 SUZ12Q15022 739 aaKnown RBP12.11□□□□□ -0.47
FRG1-201ENST00000226798 PPP1R26Q5T8A7 1209 aaPredicted RBP12.11□□□□□ -0.47
FRG1-201ENST00000226798 RESP18Q5W5W9 173 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 GRAMD1CQ8IYS0 662 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 TAS1R2Q8TE23 839 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 SNX19Q92543 992 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 IGSF8Q969P0 613 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
FRG1-201ENST00000226798 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 LHX5Q9H2C1 402 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 TM9SF3Q9HD45 589 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 MARCH2Q9P0N8 246 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 ANKRD6Q9Y2G4 727 aa12.11□□□□□ -0.47
FRG1-201ENST00000226798 FAM149AA5PLN7 773 aa12.1□□□□□ -0.47
FRG1-201ENST00000226798 GOLGA8CPA6NN73 597 aa12.1□□□□□ -0.47
FRG1-201ENST00000226798 MAPK13O15264 365 aa12.1□□□□□ -0.47
FRG1-201ENST00000226798 PAPSS1O43252 624 aaPredicted RBP12.1□□□□□ -0.47
FRG1-201ENST00000226798 TSPAN3O60637 253 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms