RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 CUL3Q13618 768 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 GALNTL6Q49A17 601 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 DNAL1Q4LDG9 190 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 CGB2Q6NT52 195 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 RGS9BPQ6ZS82 235 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 PLEKHH3Q7Z736 793 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 EDEM1Q92611 657 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 COL4A5P29400 1685 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 BCLAF3A2AJT9 711 aaKnown RBP15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 GCAP28676 217 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 SLC18A1P54219 525 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 TTC7BQ86TV6 843 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 CCDC185Q8N715 623 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 USP6NLQ92738 828 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 PTPRN2Q92932 1015 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 GBP5Q96PP8 586 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 IL1RAPL1Q9NZN1 696 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 FETUBQ9UGM5 382 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 SMIM24O75264 130 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 C6orf222P0C671 652 aaPredicted RBP15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 PROZP22891 400 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 LMO2P25791 158 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 VHLP40337 213 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 C9orf57Q5W0N0 161 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 POU5F2Q8N7G0 328 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 NAT9Q9BTE0 207 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 GEMIN8Q9NWZ8 242 aaKnown RBP15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 SLC39A10Q9ULF5 831 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 PLLPQ9Y342 182 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 MRPL42Q9Y6G3 142 aaKnown RBP15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 TEX264Q9Y6I9 313 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 OPHN1O60890 802 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 ARL1P40616 181 aaPredicted RBP15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 HDAC4P56524 1084 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 KLC1Q07866 573 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 ITGA9Q13797 1035 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 KCNJ11Q14654 390 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 STRA8Q7Z7C7 330 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 SCN4BQ8IWT1 228 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 LRRC52Q8N7C0 313 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 FAM96AQ9H5X1 160 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 MID2Q9UJV3 735 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 CCDC160A6NGH7 325 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 TPP1O14773 563 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 CSH1P0DML2 217 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 CSH2P0DML3 217 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 TPH1P17752 444 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 SLC25A41Q8N5S1 370 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 KCTD15Q96SI1 283 aaPredicted RBP15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 TINF2Q9BSI4 451 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 DENND2DQ9H6A0 471 aaPredicted RBP15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 THAP1Q9NVV9 213 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 DDX43Q9NXZ2 648 aaKnown RBP15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 SUFUQ9UMX1 484 aa15.39■□□□□ 0.05
UBE2D4-201ENST00000222402 MDM4O15151 490 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 YY1P25490 414 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 CNTFP26441 200 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 CRYMQ14894 314 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 MAP7D1Q3KQU3 841 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 FSCBQ5H9T9 825 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 WSCD1Q658N2 575 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 SCUBE1Q8IWY4 988 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 B3GALNT2Q8NCR0 500 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 HSFY1Q96LI6 401 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 PARK7Q99497 189 aaKnown RBP15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 FSD1LQ9BXM9 530 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 TASP1Q9H6P5 420 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 LRRC40Q9H9A6 602 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 SPON1Q9HCB6 807 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 KCNK4Q9NYG8 393 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 DCDC2Q9UHG0 476 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 PCDHA11Q9Y5I1 949 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 COMMD10Q9Y6G5 202 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 LTBP3Q9NS15 1303 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 C3orf70A6NLC5 250 aaPredicted RBP15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 GOLGA8TH3BQL2 631 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 JCHAINP01591 159 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 USP10Q14694 798 aaKnown RBP15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 GRAMD1BQ3KR37 738 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 SNX30Q5VWJ9 437 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 CCNJLQ8IV13 435 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 MPP5Q8N3R9 675 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 CELF6Q96J87 481 aaKnown RBP15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 ULBP1Q9BZM6 244 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 WDCPQ9H6R7 721 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 TAGLN3Q9UI15 199 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 SLC15A5A6NIM6 579 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 MEI4A8MW99 385 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 ZBTB42B2RXF5 422 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 GSTA2P09210 222 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 RALBP11234 206 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 CCNB1P14635 433 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 TFE3P19532 575 aaPredicted RBP15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 MOGSQ13724 837 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 HSP90AA5PQ58FG0 334 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 OLFML1Q6UWY5 402 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 C2orf69Q8N8R5 385 aa15.38■□□□□ 0.05
UBE2D4-201ENST00000222402 OR52K1Q8NGK4 314 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms