RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 OLFM2O95897 454 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 PFKLP17858 780 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 SDC4P31431 198 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 AVPR1AP37288 418 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 VIPR2P41587 438 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 NOP2P46087 812 aaKnown RBP17.08■□□□□ 0.32
LIM2-201ENST00000221973 RPS9P46781 194 aaKnown RBP17.08■□□□□ 0.32
LIM2-201ENST00000221973 ATP11AP98196 1134 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 CDO1Q16878 200 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 C15orf59Q2T9L4 293 aaPredicted RBP17.08■□□□□ 0.32
LIM2-201ENST00000221973 ZNF528Q3MIS6 628 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 SLC25A52Q3SY17 297 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 CCDC14Q49A88 953 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 KLHDC10Q6PID8 442 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 ZSCAN18Q8TBC5 510 aaPredicted RBP17.08■□□□□ 0.32
LIM2-201ENST00000221973 NELL1Q92832 810 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 SMARCD2Q92925 531 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 RSPRY1Q96DX4 576 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 TBCBQ99426 244 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 NPY6RQ99463 290 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 FAM204AQ9H8W3 233 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 SPATA6Q9NWH7 488 aaPredicted RBP17.08■□□□□ 0.32
LIM2-201ENST00000221973 COX16Q9P0S2 106 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 FBXO4Q9UKT5 387 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 PPP2R2CQ9Y2T4 447 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 CEP250Q9BV73 2442 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 SLC12A8A0AV02 714 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 TMEM110-MUSTN1A8MSY1 372 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 M0QYT0 321 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 ARNTLO00327 626 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 TRUB2O95900 331 aaKnown RBP17.07■□□□□ 0.32
LIM2-201ENST00000221973 HMBSP08397 361 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 PSMA2P25787 234 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 MAGEA9P43362 315 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 ZNF143P52747 638 aaPredicted RBP17.07■□□□□ 0.32
LIM2-201ENST00000221973 NME3Q13232 169 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 SH3PXD2AQ5TCZ1 1133 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 ZC3H14Q6PJT7 736 aaKnown RBP17.07■□□□□ 0.32
LIM2-201ENST00000221973 ARID3BQ8IVW6 561 aaPredicted RBP17.07■□□□□ 0.32
LIM2-201ENST00000221973 TTC16Q8NEE8 873 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 NELL2Q99435 816 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 TRMT61BQ9BVS5 477 aaKnown RBP17.07■□□□□ 0.32
LIM2-201ENST00000221973 ADAM33Q9BZ11 813 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 TRPV5Q9NQA5 729 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 GKN1Q9NS71 199 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 DDIT4Q9NX09 232 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 RRN3Q9NYV6 651 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 ZMYM5Q9UJ78 669 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 SALL4Q9UJQ4 1053 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 CPQQ9Y646 472 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 TICRRQ7Z2Z1 1910 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 MYO16Q9Y6X6 1858 aa17.07■□□□□ 0.32
LIM2-201ENST00000221973 A0A0A6YYK5 440 aaPredicted RBP17.06■□□□□ 0.32
LIM2-201ENST00000221973 MYO1FO00160 1098 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 DPYSL4O14531 572 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 CCP110O43303 1012 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 LAMTOR5O43504 91 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 BUB1O43683 1085 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 PRAMEF12O95522 483 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 IRF1P10914 325 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 PSMC3P17980 439 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 GBP1P32455 592 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 PTPN9P43378 593 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 NAP1L1P55209 391 aaKnown RBP17.06■□□□□ 0.32
LIM2-201ENST00000221973 SLC7A9P82251 487 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 ZNF252P-AS1Q0IIN9 211 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 TCEAL1Q15170 157 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 RAB6CQ53S08 254 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 OTUD1Q5VV17 481 aaPredicted RBP17.06■□□□□ 0.32
LIM2-201ENST00000221973 ZNF852Q6ZMS4 543 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 DCLK2Q8N568 766 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 ZBTB44Q8NCP5 570 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 NT5C3BQ969T7 300 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
LIM2-201ENST00000221973 CNPY3Q9BT09 278 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 KLF16Q9BXK1 252 aaPredicted RBP17.06■□□□□ 0.32
LIM2-201ENST00000221973 RAB6CQ9H0N0 254 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 BRD9Q9H8M2 597 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 LZTFL1Q9NQ48 299 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 CALCOCO1Q9P1Z2 691 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 IP6K2Q9UHH9 426 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 CCL26Q9Y258 94 aa17.06■□□□□ 0.32
LIM2-201ENST00000221973 MACROD2A1Z1Q3 448 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 BTNL10A8MVZ5 291 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 IRAK2O43187 625 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 MTA2O94776 668 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 IGLV3-25P01717 112 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 DESP17661 470 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 GDI1P31150 447 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 ARHGAP25P42331 645 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 ID4P47928 161 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 ATXN1P54253 815 aaKnown RBP17.05■□□□□ 0.32
LIM2-201ENST00000221973 TBX4P57082 545 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 ZXDBP98169 803 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 CSTF1Q05048 431 aaKnown RBP17.05■□□□□ 0.32
LIM2-201ENST00000221973 DEUP1Q05D60 604 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 MTAPQ13126 283 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 MESDQ14696 234 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 MFSD6LQ8IWD5 586 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms