RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 ABI1Q8IZP0 508 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 RIBC1Q8N443 379 aaPredicted RBP17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 FBXO36Q8NEA4 188 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 TFB1MQ8WVM0 346 aaKnown RBP17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 SEPT8Q92599 483 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 CENPTQ96BT3 561 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 KLC2Q9H0B6 622 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 ETNK1Q9HBU6 452 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 CHN1P15882 459 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 SLC5A3P53794 718 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 CBLBQ13191 982 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 MTM1Q13496 603 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 ARL13BQ3SXY8 428 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 HEATR6Q6AI08 1181 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 PPP1R21Q6ZMI0 780 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 TDRPQ86YL5 185 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 DCP1BQ8IZD4 617 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 ATP11CQ8NB49 1132 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 DQX1Q8TE96 717 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 TBK1Q9UHD2 729 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 TANC1Q9C0D5 1861 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 FOXO6A8MYZ6 492 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 SYN3O14994 580 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 METTL18O95568 372 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 SSTR1P30872 391 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 HCAR3P49019 387 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 SEC24CP53992 1094 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 VARS2Q5ST30 1063 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 NETO2Q8NC67 525 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 HTR3CQ8WXA8 447 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 LGMNQ99538 433 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 TRIM62Q9BVG3 475 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 WDCPQ9H6R7 721 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 PPANQ9NQ55 473 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 NR2E3Q9Y5X4 410 aa17.81■□□□□ 0.44
RABGGTA-201ENST00000216840 PQBP1O60828 265 aaKnown RBP17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 IGLV3-25P01717 112 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 CREB1P16220 341 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 YWHAGP61981 247 aaKnown RBP eCLIP17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 IFRD2Q12894 506 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 PRKD1Q15139 912 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 IGDCC3Q8IVU1 814 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 SCN4BQ8IWT1 228 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 MAML1Q92585 1016 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 APBB2Q92870 758 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 TKTL2Q9H0I9 626 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 ABI2Q9NYB9 513 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 RABGEF1Q9UJ41 708 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 ADAM28Q9UKQ2 775 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 OGDHLQ9ULD0 1010 aa17.8■□□□□ 0.44
RABGGTA-201ENST00000216840 POC1B-GALNT4F8VUJ3 575 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 TSHRP16473 764 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 ERCC2P18074 760 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 PHBP35232 272 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 ELK3P41970 407 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 TPI1P60174 286 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 VPS52Q8N1B4 723 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 CRIPAKQ8N1N5 446 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 XPO6Q96QU8 1125 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 FRMD8Q9BZ67 464 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 LRFN2Q9ULH4 789 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 CHMP2BQ9UQN3 213 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 TEX264Q9Y6I9 313 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 AVILO75366 819 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 APRTP07741 180 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 PGFP49763 221 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 EIF4EBP2Q13542 120 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 MRPL58Q14197 206 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 PDK1Q15118 436 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 TMED2Q15363 201 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 NFE2Q16621 373 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 FAM171A1Q5VUB5 890 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 C3orf62Q6ZUJ4 267 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 SCD5Q86SK9 330 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 TADA2BQ86TJ2 420 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 NLRP14Q86W24 1093 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 PALM2Q8IXS6 379 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 AGGF1Q8N302 714 aaeCLIP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 ATXN2LQ8WWM7 1075 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 FUBP3Q96I24 572 aaKnown RBP eCLIP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 ABCC13Q9NSE7 274 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 MARCH5Q9NX47 278 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 HCSTQ9UBK5 93 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 SNX10Q9Y5X0 201 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 PLXNA3P51805 1871 aa17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 FNDC1Q4ZHG4 1894 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 MYO18AQ92614 2054 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-201ENST00000216840 A0A0A0MRY4 1105 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 SLC11A1P49279 550 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 GLUD2P49448 558 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 CTXN3Q4LDR2 81 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 ANKRD20A2Q5SQ80 823 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 ANKRD20A1Q5TYW2 823 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 ANKRD20A3Q5VUR7 823 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 BTBD8Q5XKL5 378 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 VSTM1Q6UX27 236 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 ARHGEF18Q6ZSZ5 1173 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 FAM43BQ6ZT52 329 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 CAND1Q86VP6 1230 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms