RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 F8W810 466 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 ARVCFO00192 962 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 DCLK1O15075 740 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 METTL18O95568 372 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 YWHAHQ04917 246 aaPredicted RBP30.68■■■□□ 2.5
PABPN1-201ENST00000216727 PDK1Q15118 436 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 PRKD1Q15139 912 aaPredicted RBP30.68■■■□□ 2.5
PABPN1-201ENST00000216727 FAXCQ5TGI0 409 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 ADGRD1Q6QNK2 874 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 CTU1Q7Z7A3 348 aaKnown RBP30.68■■■□□ 2.5
PABPN1-201ENST00000216727 CAND1Q86VP6 1230 aaKnown RBP30.68■■■□□ 2.5
PABPN1-201ENST00000216727 ZNF280BQ86YH2 543 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 KANSL3Q9P2N6 904 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 B4GALT3O60512 393 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 DDHD2O94830 711 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 VAV1P15498 845 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 GLUD2P49448 558 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 ZNF135P52742 658 aaPredicted RBP30.68■■■□□ 2.5
PABPN1-201ENST00000216727 SLC18A1P54219 525 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 MTM1Q13496 603 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 BSPRYQ5W0U4 402 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 C4orf50Q6ZRC1 276 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 ARHGEF18Q6ZSZ5 1173 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 LRRC39Q96DD0 335 aa30.68■■■□□ 2.5
PABPN1-201ENST00000216727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP30.68■■■□□ 2.52e-20■■■□□ 19.2
PABPN1-201ENST00000216727 CEP350Q5VT06 3117 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 A0A0A0MRY4 1105 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 ZNF189O75820 626 aaPredicted RBP30.67■■■□□ 2.5
PABPN1-201ENST00000216727 CXCR3P49682 368 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 SEMA5AQ13591 1074 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 SYCP2LQ5T4T6 812 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 COLGALT2Q8IYK4 626 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 SPATA13Q96N96 652 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 CYTH2Q99418 400 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 ANLNQ9NQW6 1124 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 PHF24Q9UPV7 400 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 RAD54BQ9Y620 910 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 NLRC5Q86WI3 1866 aa30.67■■■□□ 2.5
PABPN1-201ENST00000216727 I6L893 689 aaPredicted RBP30.66■■■□□ 2.5
PABPN1-201ENST00000216727 COL6A1P12109 1028 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 KRT15P19012 456 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 MAGEA3P43357 314 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 PKN2Q16513 984 aaKnown RBP30.66■■■□□ 2.5
PABPN1-201ENST00000216727 GKAP1Q5VSY0 366 aaPredicted RBP30.66■■■□□ 2.5
PABPN1-201ENST00000216727 DYDC1Q8WWB3 177 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 EDEM1Q92611 657 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 PAFAH2Q99487 392 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 LGMNQ99538 433 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 FERMT1Q9BQL6 677 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 NKIRAS1Q9NYS0 192 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 FAM169AQ9Y6X4 670 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 KBTBD13C9JR72 458 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 PRPF4O43172 522 aaKnown RBP eCLIP30.66■■■□□ 2.53e-10■■■□□ 18.8
PABPN1-201ENST00000216727 AVILO75366 819 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 MAP2K2P36507 400 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 IFNAR2P48551 515 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 AGGF1Q8N302 714 aaeCLIP30.66■■■□□ 2.5
PABPN1-201ENST00000216727 CCDC33Q8N5R6 958 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 SGSM3Q96HU1 749 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 TRABDQ9H4I3 376 aa30.66■■■□□ 2.5
PABPN1-201ENST00000216727 PATJQ8NI35 1801 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 FAM47DPA6NHR8 397 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 FAM72CH0Y354 149 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 PPP1R12AO14974 1030 aaPredicted RBP30.65■■■□□ 2.5
PABPN1-201ENST00000216727 FDFT1P37268 417 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 LRRC14Q15048 493 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 ANKRD20A2Q5SQ80 823 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 FAM182AQ5T1J6 154 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 FAM72AQ5TYM5 149 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 ANKRD20A1Q5TYW2 823 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 ANKRD20A3Q5VUR7 823 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 FAM72DQ6L9T8 149 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 PDZD4Q76G19 769 aaPredicted RBP30.65■■■□□ 2.5
PABPN1-201ENST00000216727 FAM72BQ86X60 149 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 ANKRD42Q8N9B4 389 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 MGARPQ8TDB4 240 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 SEZ6LQ9BYH1 1024 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 WDCPQ9H6R7 721 aa30.65■■■□□ 2.5
PABPN1-201ENST00000216727 TCRBV9S1A1TA0A576 114 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 STK10O94804 968 aaKnown RBP30.64■■■□□ 2.5
PABPN1-201ENST00000216727 OAZ2O95190 189 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 LRRC8DQ7L1W4 858 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 SPATA2LQ8IUW3 424 aaPredicted RBP30.64■■■□□ 2.5
PABPN1-201ENST00000216727 CKAP2Q8WWK9 683 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 SEC16BQ96JE7 1060 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 TBC1D13Q9NVG8 400 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 SMG5Q9UPR3 1016 aaKnown RBP30.64■■■□□ 2.5
PABPN1-201ENST00000216727 OPHN1O60890 802 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 SELPP16109 830 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 PRMT2P55345 433 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 EFTUD2Q15029 972 aaKnown RBP eCLIP30.64■■■□□ 2.52e-7■■■□□ 19.1
PABPN1-201ENST00000216727 ARHGEF6Q15052 776 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 LRRC34Q8IZ02 419 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 SMC6Q96SB8 1091 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 TMEM161AQ9NX61 479 aa30.64■■■□□ 2.5
PABPN1-201ENST00000216727 ERCC2P18074 760 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 GRK4P32298 578 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 MSH2P43246 934 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 TPI1P60174 286 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 CDK16Q00536 496 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms