RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 LIN7AO14910 233 aaPredicted RBP16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 PPP1R12AO14974 1030 aaPredicted RBP16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 INSRRP14616 1297 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 ANPEPP15144 967 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 MRPS35P82673 323 aaKnown RBP16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 LPCAT4Q643R3 524 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 PPP1R14CQ8TAE6 165 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 CXorf38Q8TB03 319 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 SIGLEC10Q96LC7 697 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 LGMNQ99538 433 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 PTPN18Q99952 460 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 CNPY3Q9BT09 278 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 MAN1C1Q9NR34 630 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 STX18Q9P2W9 335 aaKnown RBP16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 DNAJC16Q9Y2G8 782 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 NUP205Q92621 2012 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 ACKR2O00590 384 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 APOL1O14791 398 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 B4GALT4O60513 344 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 STK10O94804 968 aaKnown RBP16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 ENDOD1O94919 500 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 CELF2O95319 508 aaKnown RBP16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 TGDSO95455 350 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 C22orf31O95567 290 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 PROZP22891 400 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 SLC26A2P50443 739 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 RABGGTBP53611 331 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 AP3M2P53677 418 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 MBTD1Q05BQ5 628 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 AP1B1Q10567 949 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 KRT72Q14CN4 511 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 FASTKD1Q53R41 847 aaKnown RBP16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 RNF111Q6ZNA4 994 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 TSHZ1Q6ZSZ6 1077 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 TTC30AQ86WT1 665 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 STKLD1Q8NE28 680 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 CCDC106Q9BWC9 280 aa16.35■□□□□ 0.21
SNAPC1-201ENST00000216294 A0A1B0GVG6 124 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 CHADO15335 359 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 MAP3K7O43318 606 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 SNAI1O95863 264 aaPredicted RBP16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 GSRP00390 522 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 LMNAP02545 664 aaKnown RBP16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 SLC10A6Q3KNW5 377 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 KHSRPQ92945 711 aaKnown RBP eCLIP16.34■□□□□ 0.213e-6■■■■□ 21
SNAPC1-201ENST00000216294 AZIN2Q96A70 460 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 MRPL45Q9BRJ2 306 aaKnown RBP16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 KATNBL1Q9H079 304 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 LRCH1Q9Y2L9 728 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 CYP2F1P24903 491 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 HDAC4P56524 1084 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 INHBEP58166 350 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 LAMC2Q13753 1193 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 GLRA4Q5JXX5 417 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 MAVSQ7Z434 540 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 ANKRD23Q86SG2 305 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 DPP9Q86TI2 863 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 CRLF3Q8IUI8 442 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 TUBGCP5Q96RT8 1024 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 C2orf40Q9H1Z8 148 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 VTA1Q9NP79 307 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 SPATS2LQ9NUQ6 558 aaKnown RBP16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 SIRPGQ9P1W8 387 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 PAK5Q9P286 719 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 EMCNQ9ULC0 261 aa16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 G3BP2Q9UN86 482 aaKnown RBP16.34■□□□□ 0.21
SNAPC1-201ENST00000216294 SPECC1L-ADORA2AF8WAN1 911 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 BPGMP07738 259 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 TMEM62Q0P6H9 643 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 STX3Q13277 289 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 TCHHL1Q5QJ38 904 aaPredicted RBP16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 N4BP2L1Q5TBK1 243 aaPredicted RBP16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 KCNT2Q6UVM3 1135 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 TMPRSS6Q8IU80 811 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 TNS4Q8IZW8 715 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 CCDC185Q8N715 623 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 PGBD4Q96DM1 585 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 ZNF184Q99676 751 aaPredicted RBP16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 KCNK4Q9NYG8 393 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 SEPT10Q9P0V9 454 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 MORF4L1Q9UBU8 362 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 SLC45A1Q9Y2W3 748 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 HES2Q9Y543 173 aa16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 MRPL42Q9Y6G3 142 aaKnown RBP16.33■□□□□ 0.21
SNAPC1-201ENST00000216294 PLXNB2O15031 1838 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 CCDC78A2IDD5 438 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 TPP1O14773 563 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 USP12O75317 370 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 SKIP12755 728 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 ETS2P15036 469 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 MSX2P35548 267 aaPredicted RBP16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 SPRYD7Q5W111 196 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 ILDR2Q71H61 639 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 CMC1Q7Z7K0 106 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 EXOC8Q8IYI6 725 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 MTBPQ96DY7 904 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 KLC2Q9H0B6 622 aa16.33■□□□□ 0.2
SNAPC1-201ENST00000216294 FZD8Q9H461 694 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms