RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NPC1O15118 1278 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 TOP3BO95985 862 aaKnown RBP15.66■□□□□ 0.1
UPK3A-201ENST00000216211 CALCAP01258 141 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 SETSIPP0DME0 302 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 SPINK2P20155 84 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 HARS2P49590 506 aaKnown RBP15.66■□□□□ 0.1
UPK3A-201ENST00000216211 RGS7P49802 495 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 ATXN3P54252 364 aaPredicted RBP15.66■□□□□ 0.1
UPK3A-201ENST00000216211 GFPT1Q06210 699 aaPredicted RBP15.66■□□□□ 0.1
UPK3A-201ENST00000216211 ENPP2Q13822 863 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 CCDC40Q4G0X9 1142 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 PKDCCQ504Y2 493 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 TMEM215Q68D42 235 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 RABEPKQ7Z6M1 372 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 RGL4Q8IZJ4 473 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 OR2I1PQ8NGU4 316 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 KCTD13Q8WZ19 329 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 TFAP2BQ92481 460 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 KAT5Q92993 513 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 ZNF419Q96HQ0 510 aaPredicted RBP15.66■□□□□ 0.1
UPK3A-201ENST00000216211 CEP63Q96MT8 703 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 NT5C1BQ96P26 610 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 CIPCQ9C0C6 399 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 MKRN2Q9H000 416 aaKnown RBP15.66■□□□□ 0.1
UPK3A-201ENST00000216211 ABCC13Q9NSE7 274 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 ELOVL2Q9NXB9 296 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 MAN1B1Q9UKM7 699 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 PCDHB4Q9Y5E5 795 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 WDFY3Q8IZQ1 3526 aa15.66■□□□□ 0.1
UPK3A-201ENST00000216211 RNF225M0QZC1 329 aaPredicted RBP15.65■□□□□ 0.1
UPK3A-201ENST00000216211 MSI1O43347 362 aaKnown RBP15.65■□□□□ 0.1
UPK3A-201ENST00000216211 SYNCRIPO60506 623 aaKnown RBP15.65■□□□□ 0.1
UPK3A-201ENST00000216211 GABBR2O75899 941 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 PAEPP09466 180 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 PRKCHP24723 683 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 MAOBP27338 520 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 HOXD9P28356 352 aaPredicted RBP15.65■□□□□ 0.1
UPK3A-201ENST00000216211 CD6P30203 668 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 DAOAP59103 153 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 MPPE1Q53F39 396 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 KLHL10Q6JEL2 608 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 PMF1Q6P1K2 205 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 LCLAT1Q6UWP7 414 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 PPM1KQ8N3J5 372 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 MINDY1Q8N5J2 469 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 RBBP8NLQ8NC74 664 aaPredicted RBP15.65■□□□□ 0.1
UPK3A-201ENST00000216211 DHTKD1Q96HY7 919 aaPredicted RBP15.65■□□□□ 0.1
UPK3A-201ENST00000216211 ZSWIM1Q9BR11 485 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 SLC2A11Q9BYW1 496 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 CNGB3Q9NQW8 809 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 ITM2CQ9NQX7 267 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 WSB2Q9NYS7 404 aaPredicted RBP15.65■□□□□ 0.1
UPK3A-201ENST00000216211 USP36Q9P275 1121 aaKnown RBP15.65■□□□□ 0.1
UPK3A-201ENST00000216211 KIAA1257Q9ULG3 409 aa15.65■□□□□ 0.1
UPK3A-201ENST00000216211 HBS1LQ9Y450 684 aaKnown RBP15.65■□□□□ 0.1
UPK3A-201ENST00000216211 AKAP13Q12802 2813 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 KCNJ18B7U540 433 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 M0QYV0 167 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 ARHGAP33O14559 1287 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 OPHN1O60890 802 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 LETM1O95202 739 aaPredicted RBP15.64■□□□□ 0.09
UPK3A-201ENST00000216211 EPHX1P07099 455 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 BMP6P22004 513 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 BRD2P25440 801 aaKnown RBP15.64■□□□□ 0.09
UPK3A-201ENST00000216211 SGSHP51688 502 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 ZNF132P52740 706 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 COPAP53621 1224 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 ARID5AQ03989 594 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 SEMA3BQ13214 749 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 EIF4HQ15056 248 aaKnown RBP15.64■□□□□ 0.09
UPK3A-201ENST00000216211 CACNA1EQ15878 2313 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 PLEKHG6Q3KR16 790 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 CCDC183Q5T5S1 534 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 METTL3Q86U44 580 aaKnown RBP15.64■□□□□ 0.09
UPK3A-201ENST00000216211 CACUL1Q86Y37 369 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 TMPRSS6Q8IU80 811 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 SCML4Q8N228 414 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 HDDC3Q8N4P3 179 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 LMO3Q8TAP4 145 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 CLEC4CQ8WTT0 213 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 SLC35F5Q8WV83 523 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 SIPA1Q96FS4 1042 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 TOE1Q96GM8 510 aaKnown RBP15.64■□□□□ 0.09
UPK3A-201ENST00000216211 SLC32A1Q9H598 525 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.64■□□□□ 0.09
UPK3A-201ENST00000216211 WASF3Q9UPY6 502 aa15.64■□□□□ 0.09
UPK3A-201ENST00000216211 NYNRINQ9P2P1 1898 aaKnown RBP15.63■□□□□ 0.09
UPK3A-201ENST00000216211 GOLGA6L3A6NEY3 463 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 MEI4A8MW99 385 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 PPP1R3GB7ZBB8 358 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 PMM2O15305 246 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 NCAM1P13591 858 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 HLA-EP13747 358 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 HLA-FP30511 346 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 TPMTP51580 245 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 NUMA1Q14980 2115 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 E2F5Q15329 346 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 CNGA2Q16280 664 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 WDR45BQ5MNZ6 344 aa15.63■□□□□ 0.09
UPK3A-201ENST00000216211 SYCP2LQ5T4T6 812 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms