RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 IL17RAQ96F46 866 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 KCNN2Q9H2S1 579 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 WBP11Q9Y2W2 641 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 MTCL1Q9Y4B5 1905 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 NACAE9PAV3 2078 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ENTPD5O75356 428 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 PLOD1Q02809 727 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 TRAP1Q12931 704 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SLC45A4Q5BKX6 768 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 NUP93Q8N1F7 819 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 DNAJB8Q8NHS0 232 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 TAS2R13Q9NYV9 303 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 HSPBP1Q9NZL4 362 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 PYCARDQ9ULZ3 195 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SNX7Q9UNH6 387 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ERGIC3Q9Y282 383 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 DIDO1Q9BTC0 2240 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 B2RBV5 119 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 HS6ST1O60243 411 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 TSPAN9O75954 239 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SNX4O95219 450 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 APOC1P02654 83 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 PPP3CCP48454 512 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CYP27A1Q02318 531 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 IRGCQ6NXR0 463 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ARHGAP22Q7Z5H3 698 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SPASTQ9UBP0 616 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ADAM28Q9UKQ2 775 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SLC39A10Q9ULF5 831 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 BAIAP2Q9UQB8 552 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 RPS6KL1Q9Y6S9 549 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 HAT1O14929 419 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 AKAP8O43823 692 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 TPP2P29144 1249 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ERAP2Q6P179 960 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 GLYCTKQ8IVS8 523 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 C17orf53Q8N3J3 647 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 EXT2Q93063 718 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 KIF12Q96FN5 646 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 C11orf70Q9BRQ4 267 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 NOL6Q9H6R4 1146 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CHORDC1Q9UHD1 332 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ACOT9Q9Y305 439 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ZNF451Q9Y4E5 1061 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CEP170BQ9Y4F5 1589 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SEC31AO94979 1220 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ITGALP20701 1170 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CASP4P49662 377 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ACCSLQ4AC99 568 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 TDRD10Q5VZ19 366 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SLC25A24Q6NUK1 477 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ABRAXAS1Q6UWZ7 409 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SCN4BQ8IWT1 228 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 FEZF2Q8TBJ5 459 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 TEFMQ96QE5 360 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 PIGSQ96S52 555 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 KLHL25Q9H0H3 589 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SARS2Q9NP81 518 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ASAP1Q9ULH1 1129 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ASCC3Q8N3C0 2202 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SLC9A3R1O14745 358 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 LDLRP01130 860 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 PDGFRAP16234 1089 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SCTRP47872 440 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CDH17Q12864 832 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 MROH9Q5TGP6 573 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ANKRD49Q8WVL7 239 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 EHD1Q9H4M9 534 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 EXOSC4Q9NPD3 245 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ABT1Q9ULW3 272 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 DYRK1BQ9Y463 629 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 AKAP6Q13023 2319 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 BBIP1A8MTZ0 92 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 USP17L15C9J2P7 530 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 USP17L13C9JLJ4 530 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 USP17L11C9JVI0 530 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 USP17L18D6R9N7 530 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 USP17L22D6RA61 530 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 USP17L17D6RBQ6 530 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 USP17L19D6RCP7 530 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 USP17L20D6RJB6 530 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 IDO1P14902 403 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CPA1P15085 419 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 AXLP30530 894 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 USP17L24Q0WX57 530 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ZNF284Q2VY69 593 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SMIM5Q71RC9 77 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 NET1Q7Z628 596 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 JAMLQ86YT9 394 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 REM2Q8IYK8 340 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SERPINE1P05121 402 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ZCCHC18P0CG32 403 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 PEPDP12955 493 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CLK3P49761 638 aaKnown RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CAPZA1P52907 286 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 KLHL24Q6TFL4 600 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 DNAAF5Q86Y56 855 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 NBPF15Q8N660 670 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SPAG4Q9NPE6 437 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms