RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Taf10Q8K0H5 218 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 CtbsQ8R242 366 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Nol6Q8R5K4 1152 aaKnown RBP8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 NifkQ91VE6 317 aaKnown RBP8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Nmrk1Q91W63 195 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 FtcdQ91XD4 541 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Apobec3Q99J72 440 aaKnown RBP8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Rps21Q9CQR2 83 aaKnown RBP8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 ZwintQ9CQU5 252 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Mrpl44Q9CY73 333 aaKnown RBP8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Cd274Q9EP73 290 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 SigirrQ9JLZ8 409 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Rnf103Q9R1W3 683 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Gipc1Q9Z0G0 333 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Col6a5A6H584 2640 aa8.34□□□□□ -1.07
Scn8a-202ENSMUST00000096198 Myh11O08638 1972 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Arid1bE9Q4N7 2244 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Gm13283A0A087WPG5 182 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 A0A286YCH8 300 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 3110040M04RikA0A286YDK0 300 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 A0A286YE43 300 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Gm7903A2AWL1 463 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Dennd5bA2RSQ0 1274 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 TrdnE9Q9K5 693 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Vmn2r45L7N2B5 852 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Nthl1O35980 300 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Arhgap6O54834 987 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Itgb3O54890 787 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Reps1O54916 795 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Sod1P08228 154 aaKnown RBP8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Anxa6P14824 673 aaKnown RBP8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Slc7a2P18581 657 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Cd68P31996 326 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Usp4P35123 962 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Pla2g2cP48076 150 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Zdhhc9P59268 364 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Gm10775Q3V290 127 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Bfsp2Q6NVD9 416 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Rtp2Q80ZI2 223 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Tcaf1Q8BNE1 924 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Clasp2Q8BRT1 1286 aaKnown RBP8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Pias2Q8C5D8 621 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Zfp113Q8C689 439 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Tram1l1Q8QZR0 363 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Mark1Q8VHJ5 795 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Terf2ipQ91VL8 393 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Tnpo2Q99LG2 887 aaKnown RBP8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 AasdhpptQ9CQF6 309 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Uqcrfs1Q9CR68 274 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Tfcp2Q9ERA0 502 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Msh5Q9QUM7 833 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Phtf1Q9QZ09 761 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Adamts5Q9R001 930 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Srebf1Q9WTN3 1134 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 DmtnQ9WV69 405 aa8.33□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Zscan20B2KFW1 1030 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Zfp229E9PWT2 705 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Cldn5O54942 218 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Epb41l2O70318 988 aaKnown RBP8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Cyr61P18406 379 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Mat2aQ3THS6 395 aaKnown RBP8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Qsox2Q3TMX7 692 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Agap2Q3UHD9 1186 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Naf1Q3UMQ8 489 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Trim80Q3V061 624 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Oca2Q62052 833 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Pick1Q62083 416 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 FAM120AQ6A0A9 1112 aaKnown RBP8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Olfr832Q7TRG9 312 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Ldhal6bQ8BVP2 382 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Nadk2Q8C5H8 452 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Sphk1Q8CI15 382 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Nup58Q8R332 587 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Wasf1Q8R5H6 559 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Pcdhb1Q91Y08 818 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Pde2aQ922S4 916 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Wdr6Q99ME2 1125 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Tnk1Q99ML2 666 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 CactinQ9CS00 772 aaKnown RBP8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Q9D454 513 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Stx6Q9JKK1 255 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Sema4gQ9WUH7 837 aa8.32□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Cela3aA2A9U8 283 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Gm14443A2ARX0 610 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Gm10717D3Z1I8 228 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Mroh8E9PYI4 1049 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Wdr78E9PYY5 807 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Gm3159K7N760 267 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Cacna2d1O08532 1103 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 MttpO08601 894 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 FosbP13346 338 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Slc2a4P14142 509 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 IvlP48997 467 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Nap1l2P51860 460 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Mrps6P58064 125 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Psmc1P62192 440 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Igsf9Q05BQ1 1179 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Cpa2Q504N0 417 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Ppp2r5aQ6PD03 486 aa8.31□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Abhd13Q80UX8 337 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms