RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Arf5P84084 180 aaKnown RBP9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nhej1Q3KNJ2 295 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rnf43Q5NCP0 784 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pla2g4cQ64GA5 597 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Muc19Q6JHY2 733 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Snx13Q6PHS6 957 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Slc44a1Q6X893 653 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Fam205cQ80YD3 371 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Scfd1Q8BRF7 639 aaKnown RBP9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ints5Q8CHT3 1018 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Spp2Q8K1I3 203 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Arfip2Q8K221 341 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Agfg1Q8K2K6 561 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 DaglbQ91WC9 669 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pcdhgb2Q91XX7 928 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Stk33Q924X7 491 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mad2l2Q9D752 211 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Btbd17Q9DB72 478 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pi16Q9ET66 489 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cdk20Q9JHU3 346 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Slc29a1Q9JIM1 460 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tfap4Q9JIZ5 338 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Sppl2aQ9JJF9 523 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Orc3Q9JK30 715 aaKnown RBP9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mrpl39Q9JKF7 336 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cyhr1Q9QXA1 311 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Irgm2A0A140LIF8 407 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gm7168A0AUV4 508 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Prr16A3KMN5 304 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 C7D3YXF5 845 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Zfp358E9Q8M1 571 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gm21319F6YNI8 144 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 F830016B08RikG3UWE2 416 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mex3aG3UYU0 520 aaKnown RBP9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rnf148G3X9R7 316 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gm6401L7N2C0 213 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pde3bQ61409 1100 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 NntQ61941 1086 aaKnown RBP9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Wnt8aQ64527 354 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 CltbQ6IRU5 229 aaKnown RBP9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pum1Q80U78 1189 aaKnown RBP9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ddhd1Q80YA3 547 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rnaseh2bQ80ZV0 308 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Slc36a3Q811P0 477 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 PdhxQ8BKZ9 501 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Efl1Q8C0D5 1127 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Thop1Q8C1A5 687 aaKnown RBP9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Satb2Q8VI24 733 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pcdhb15Q91Y04 786 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gstt3Q99L20 241 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Med30Q9CQI9 178 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Fam187aQ9D3R5 417 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rassf7Q9DD19 359 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr706Q9EPF8 316 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cd97Q9Z0M6 818 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tcf7l1Q9Z1J1 584 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tns2Q8CGB6 1400 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr231E9Q0M4 307 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr555E9Q547 315 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Chrna9G3X8Z7 479 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 M6prP24668 278 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 PitpnbP53811 271 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Map3k13Q1HKZ5 959 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Fubp3Q3TIX6 575 aaKnown RBP9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tmem184cQ3TPR7 525 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Foxred2Q3USW5 665 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ccnl1Q52KE7 532 aaKnown RBP9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Eid2Q6X7S9 236 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Prpf18Q8BM39 342 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Iqcb1Q8BP00 598 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Sec22cQ8BXT9 303 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Kat14Q8CID0 779 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 AcmsdQ8R519 336 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 MlphQ91V27 590 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rabep2Q91WG2 554 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tab2Q99K90 693 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Timm22Q9CQ85 194 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Atp5f1Q9CQQ7 256 aaKnown RBP9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Adgrf4Q9D2L6 698 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ttyh1Q9D3A9 450 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cib4Q9D9N5 185 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mettl7bQ9DD20 244 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Htra2Q9JIY5 458 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nipa2Q9JJC8 359 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Dach1Q9QYB2 751 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Adam26aQ9R158 697 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Sik3Q6P4S6 1311 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mmrn2A6H6E2 943 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Clrn2B2RVW2 232 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Trappc11B2RXC1 1133 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 En2P09066 324 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ier2P17950 221 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 AhsgP29699 345 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Inpp1P49442 396 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Prelid2Q0VBB0 177 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Q3TYL0 343 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Foxk2Q3UCQ1 651 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 MyrflQ3UN70 904 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 BadQ61337 204 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms