RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Il17rbQ9JIP3 499 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Cbx8Q9QXV1 362 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pcdh7A0A0A6YY83 1255 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Igkv5-45A0A0B4J1J1 115 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 6030498E09RikB1AX85 169 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gap43P06837 227 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Irx1P81068 480 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Acsbg2Q2XU92 667 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fbxw11Q5SRY7 542 aaKnown RBP9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tmem199Q5SYH2 208 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tmem45aQ60774 273 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 PterQ60866 349 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 MyorgQ69ZQ1 716 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Nrg1Q6DR99 700 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Znf821Q6PD05 413 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Olfr867Q7TRF3 331 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Wdr59Q8C0M0 992 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Robo4Q8C310 1012 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fbxl13Q8CDU4 790 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Cox18Q8VC74 331 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pde2aQ922S4 916 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Lrp8Q924X6 996 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rfc5Q9D0F6 339 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Polr3cQ9D483 533 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ddx21Q9JIK5 851 aaKnown RBP9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gde1Q9JL56 331 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Irs2P81122 1321 aa9.01□□□□□ -0.97
Trim39-201ENSMUST00000042717 Dock1Q8BUR4 1865 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Usp51B1AY15 661 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 NoctO35710 429 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Banf1O54962 89 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fgf18O89101 207 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Zfy1P10925 782 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Zfy2P20662 777 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gad2P48320 585 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Btg3P50615 252 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pkn1P70268 946 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ccdc61Q3UJV1 511 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 MlipQ5FW52 269 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Syn2Q64332 586 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tas2r102Q7M717 329 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Eif2aQ8BJW6 581 aaKnown RBP9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Znf689Q8BKK5 500 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Daam1Q8BPM0 1077 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gjc2Q8BQU6 440 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 DrgxQ8BYH0 263 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 4921504E06RikQ8CET2 560 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fam151aQ8QZW3 608 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 McmbpQ8R3C0 642 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pcdha3Q91Y16 942 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Atg7Q9D906 698 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tsga13Q9DA17 273 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 M1apQ9Z0E1 529 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Alpk2Q91ZB0 2144 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Bclaf3A2AG58 752 aaKnown RBP9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Aldoart1A6ZI46 419 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 March10E9PX79 788 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ercc2O08811 760 aaKnown RBP9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Man2b1O09159 1013 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 CopeO89079 308 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ccnb1P24860 430 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Akr1b8P45377 316 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 B3gntl1Q3U129 357 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Adad1Q5SUE7 619 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rtl3Q6P1Y1 553 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ccdc181Q80ZU5 509 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rassf4Q8CB96 322 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Atg14Q8CDJ3 492 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Barhl2Q8VIB5 384 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 TrabdQ99JY4 376 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pdxdc1Q99K01 787 aaKnown RBP9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pramel1Q99MW3 458 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Cog8Q9JJA2 640 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Clec1bQ9JL99 229 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Nfu1Q9QZ23 255 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 IkbkeQ9R0T8 717 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Oaz3Q9R109 243 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Phf2Q9WTU0 1096 aa9□□□□□ -0.97
Trim39-201ENSMUST00000042717 Atg2aQ6P4T0 1914 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tmem240B2RWJ3 173 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Vmn2r39L7N2E5 861 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 TertO70372 1122 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Yme1l1O88967 715 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Hmga1P17095 107 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Kif2aP28740 705 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Psma2P49722 234 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rpl10aP53026 217 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rpl22P67984 128 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Sycp3P70281 254 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ctnnb1Q02248 781 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Plpp4Q0VBU9 271 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Cyp2c65Q148B1 490 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ccdc114Q3UX62 658 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Kpna1Q60960 538 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Cyp3a13Q64464 503 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Q6DFW0 481 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Enpp3Q6DYE8 874 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Dennd1aQ8K382 1016 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Traf3ip2Q8N7N6 555 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tspan33Q8R3S2 283 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms