RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Armcx5Q3UZB0 606 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Sh3gl2Q62420 352 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Klhl24Q8BRG6 600 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Atp6v1hQ8BVE3 483 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Rsl1d1Q8BVY0 452 aaKnown RBP8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Nusap1Q9ERH4 427 aaKnown RBP8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Pola2P33611 600 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Psmc6P62334 389 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Pstpip1P97814 415 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 P3h1Q3V1T4 739 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Rhox12Q4TU81 186 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Fam126aQ6P9N1 521 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Dmrtc1Q9D9R7 182 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 PfasQ5SUR0 1337 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Hk2O08528 917 aaKnown RBP8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 GcatO88986 416 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 AaasP58742 546 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Zfp560Q3URI6 754 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Esrp1Q3US41 680 aaKnown RBP8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Smarcd1Q61466 515 aaKnown RBP8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Lag3Q61790 521 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Cdc73Q8JZM7 531 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Pcdhb10Q91VE5 797 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Hars2Q99KK9 505 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Ppp1r3aQ99MR9 1089 aa8.47□□□□□ -1.05
Ssr1-201ENSMUST00000021864 DgkhD3YXJ0 1156 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 SarsP26638 512 aaKnown RBP8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Kpnb1P70168 876 aaKnown RBP8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 WlsQ6DID7 541 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Lrig3Q6P1C6 1117 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Nup107Q8BH74 926 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Mis18aQ9CZJ6 204 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Efhd2Q9D8Y0 240 aaKnown RBP8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Myh4Q5SX39 1939 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Clk3O35492 638 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Aldh2P47738 519 aaKnown RBP8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 ThraP63058 492 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 CopaQ8CIE6 1224 aaKnown RBP8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Caap1Q8VDY9 356 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Gm5930D3Z257 264 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Cacna2d1O08532 1103 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Taf13P61216 124 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Tbx3P70324 741 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Btg1-ps1Q3V0S2 161 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Btg1-ps2Q3V0X0 161 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Atg16l2Q6KAU8 623 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Fnip2Q80TD3 1108 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Pwp2Q8BU03 919 aaKnown RBP8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Wdr11Q8K1X1 1223 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Tti1Q91V83 1085 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 Vangl2Q91ZD4 521 aa8.46□□□□□ -1.05
Ssr1-201ENSMUST00000021864 4933424G06RikA0A140LIP3 267 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Itgb3O54890 787 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Scd1P13516 355 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Krt6aP50446 553 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Rasip1Q3U0S6 961 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Nat9Q3UG98 241 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Cdkn2aipQ8BI72 563 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Zc3h6Q8BYK8 1177 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Slc47a1Q8K0H1 567 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Pcdhb1Q91Y08 818 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Serbp1Q9CY58 407 aaKnown RBP8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 4933425L06RikQ9D3Z8 585 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Alg13Q9D8C3 1166 aaKnown RBP8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Plscr1Q9JJ00 328 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Gdf10P97737 476 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Tmem120bQ3TA38 339 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Mettl3Q8C3P7 580 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Dpy30Q99LT0 99 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Msh5Q9QUM7 833 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Katna1Q9WV86 491 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Umodl1Q5DID3 1319 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 GlrbP48168 496 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hdgfl2Q3UMU9 669 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Mapre3Q6PER3 281 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Aldh3b1Q80VQ0 468 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Gper1Q8BMP4 375 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Zfp57Q8C6P8 421 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 ThtpaQ8JZL3 224 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Nwd2Q6P5U7 1742 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Fgf15O35622 218 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Ms4a2P20490 235 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 RalgdsQ03385 852 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Eme1Q8BJW7 570 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Trpa1Q8BLA8 1125 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Exd2Q8VEG4 650 aaKnown RBP8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Rxfp2Q91ZZ5 737 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 CoprsQ9CQ13 173 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Rpf2Q9JJ80 306 aaKnown RBP8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Tmem245B1AZA5 876 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hist1h2abC0HKE1 130 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hist1h2acC0HKE2 130 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hist1h2adC0HKE3 130 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hist1h2aeC0HKE4 130 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hist1h2agC0HKE5 130 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hist1h2aiC0HKE6 130 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hist1h2anC0HKE7 130 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hist1h2aoC0HKE8 130 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Hist1h2apC0HKE9 130 aa8.46□□□□□ -1.06
Ssr1-201ENSMUST00000021864 Gm15448F6PZL4 682 aa8.46□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms