RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 IL1R2P27930 398 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 CCR1P32246 355 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 MARCKSL1P49006 195 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 SLC25A11Q02978 314 aaKnown RBP18.17■□□□□ 0.5
PHGDH-230ENST00000641927 ITIH3Q06033 890 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 CLUL1Q15846 466 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 ODF2Q5BJF6 829 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 ZC3H12AQ5D1E8 599 aaKnown RBP18.17■□□□□ 0.5
PHGDH-230ENST00000641927 DNTTIP2Q5QJE6 756 aaKnown RBP18.17■□□□□ 0.5
PHGDH-230ENST00000641927 ATAT1Q5SQI0 421 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 CCDC185Q8N715 623 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 ITFG1Q8TB96 612 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 HSPH1Q92598 858 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 CD101Q93033 1021 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 ACSF2Q96CM8 615 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-230ENST00000641927 HES6Q96HZ4 224 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 PEBP4Q96S96 227 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 TLR10Q9BXR5 811 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 WDR6Q9NNW5 1121 aaKnown RBP18.17■□□□□ 0.5
PHGDH-230ENST00000641927 KLHL11Q9NVR0 708 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 OBSL1O75147 1896 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 MOSPD3O75425 235 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 IRF1P10914 325 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 FSHRP23945 695 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 DDX6P26196 483 aaKnown RBP eCLIP18.16■□□□□ 0.5
PHGDH-230ENST00000641927 CTNNA1P35221 906 aaKnown RBP18.16■□□□□ 0.5
PHGDH-230ENST00000641927 AVPR1AP37288 418 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 CXCR3P49682 368 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 KPNA1P52294 538 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-230ENST00000641927 TRIP4Q15650 581 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-230ENST00000641927 ARL13BQ3SXY8 428 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 TXNRD3NBQ6F5E7 133 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 GUCD1Q96NT3 240 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 SLC46A2Q9BY10 475 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 TKTL2Q9H0I9 626 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 PCDHA3Q9Y5H8 950 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 EYSQ5T1H1 3165 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 ANAPC1Q9H1A4 1944 aa18.16■□□□□ 0.5
PHGDH-230ENST00000641927 FANCGO15287 622 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 MOCS2O96007 188 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-230ENST00000641927 CTNNA2P26232 953 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 LTBRP36941 435 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 COG7P83436 770 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 CBX2Q14781 532 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-230ENST00000641927 ATP13A4Q4VNC1 1196 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 GET4Q7L5D6 327 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-230ENST00000641927 TASP1Q9H6P5 420 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 TMPRSS4Q9NRS4 437 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 GKN1Q9NS71 199 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.15■□□□□ 0.5
PHGDH-230ENST00000641927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.15■□□□□ 0.5
PHGDH-230ENST00000641927 HBS1LQ9Y450 684 aaKnown RBP18.15■□□□□ 0.5
PHGDH-230ENST00000641927 C2orf16Q68DN1 1984 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 KCNK3O14649 394 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 OLFM2O95897 454 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 APOEP02649 317 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 KRT1P04264 644 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 RARAP10276 462 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 SLC2A3P11169 496 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 RWDD2BP57060 319 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 NNTQ13423 1086 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 EIF4EBP2Q13542 120 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-230ENST00000641927 BOLA3Q53S33 107 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 BRMS1LQ5PSV4 323 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 ERMARDQ5T6L9 678 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 LRRC38Q5VT99 294 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 POLNQ7Z5Q5 900 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 CMTM8Q8IZV2 173 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 SNRNP25Q9BV90 132 aaKnown RBP18.15■□□□□ 0.5
PHGDH-230ENST00000641927 SMG9Q9H0W8 520 aaKnown RBP18.15■□□□□ 0.5
PHGDH-230ENST00000641927 S1PR5Q9H228 398 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 GPATCH2LQ9NWQ4 482 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 CPQQ9Y646 472 aa18.15■□□□□ 0.5
PHGDH-230ENST00000641927 CLUHO75153 1309 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 NOTCH4Q99466 2003 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 DDX3YO15523 660 aaKnown RBP18.14■□□□□ 0.49
PHGDH-230ENST00000641927 PFKLP17858 780 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 CXCR5P32302 372 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 ADRA1BP35368 520 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 KCNQ1P51787 676 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 PPP2R5DQ14738 602 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 COL19A1Q14993 1142 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 EFHC2Q5JST6 749 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 CCDC50Q8IVM0 306 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 KCTD6Q8NC69 237 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 KIF18AQ8NI77 898 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 UBE2Q2Q8WVN8 375 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 ALG3Q92685 438 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 SLC39A13Q96H72 371 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 FCRL2Q96LA5 508 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-230ENST00000641927 RIPOR3Q96MK2 946 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 KLF16Q9BXK1 252 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-230ENST00000641927 DHX35Q9H5Z1 703 aaKnown RBP18.14■□□□□ 0.49
PHGDH-230ENST00000641927 TMEM51Q9NW97 253 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 DDX56Q9NY93 547 aaKnown RBP18.14■□□□□ 0.49
PHGDH-230ENST00000641927 SLC12A6Q9UHW9 1150 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 AP4E1Q9UPM8 1137 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 XIRP2A4UGR9 3374 aa18.14■□□□□ 0.49
PHGDH-230ENST00000641927 DENND4CQ5VZ89 1909 aa18.13■□□□□ 0.49
PHGDH-230ENST00000641927 H3BQ06 376 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms