RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 OAS1P00973 400 aaKnown RBP13.47□□□□□ -0.25
PHGDH-218ENST00000641491 PCK1P35558 622 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 AIF1P55008 147 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 HADHBP55084 474 aaKnown RBP13.47□□□□□ -0.25
PHGDH-218ENST00000641491 GNG11P61952 73 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 DLX2Q07687 328 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-218ENST00000641491 TCEAL1Q15170 157 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 SLC5A9Q2M3M2 681 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 CCDC14Q49A88 953 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 PRSS36Q5K4E3 855 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 ZNF569Q5MCW4 686 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 SYPL2Q5VXT5 272 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 LRRC31Q6UY01 552 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 FAM131BQ86XD5 332 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 MAP7D3Q8IWC1 876 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 RHOT1Q8IXI2 618 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 ZNF276Q8N554 614 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 NIPA2Q8N8Q9 360 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 TPCN2Q8NHX9 752 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 ITFG1Q8TB96 612 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 ZSCAN18Q8TBC5 510 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-218ENST00000641491 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
PHGDH-218ENST00000641491 MSLNLQ96KJ4 702 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 ZWILCHQ9H900 591 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 TDP1Q9NUW8 608 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 TRIM10Q9UDY6 481 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 PCSK1NQ9UHG2 260 aa13.47□□□□□ -0.25
PHGDH-218ENST00000641491 RCCD1A6NED2 376 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 MIF4GDA9UHW6 222 aaKnown RBP13.46□□□□□ -0.25
PHGDH-218ENST00000641491 KIF2AO00139 706 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-218ENST00000641491 SLC9A3R1O14745 358 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-218ENST00000641491 DAPK3O43293 454 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 BUB1BO60566 1050 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-218ENST00000641491 GABBR2O75899 941 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 TBX18O95935 607 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 CCR2P41597 374 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 DNA2P51530 1060 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 SLC7A9P82251 487 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 BHLHA9Q7RTU4 235 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 SLFN11Q7Z7L1 901 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 CCDC50Q8IVM0 306 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 NPAS3Q8IXF0 933 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 CELF5Q8N6W0 485 aaKnown RBP13.46□□□□□ -0.25
PHGDH-218ENST00000641491 HSPH1Q92598 858 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 FGF13Q92913 245 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 SMARCD2Q92925 531 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 PGAP3Q96FM1 320 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-218ENST00000641491 NPY6RQ99463 290 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 LRRC3Q9BY71 257 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 S1PR5Q9H228 398 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 ZFP14Q9HCL3 533 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 OSER1Q9NX31 292 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 DDX56Q9NY93 547 aaKnown RBP13.46□□□□□ -0.25
PHGDH-218ENST00000641491 STIM2Q9P246 746 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 CFAP97Q9P2B7 532 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 USP18Q9UMW8 372 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 ARHGAP26Q9UNA1 814 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 DUSP10Q9Y6W6 482 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 PTPRDP23468 1912 aa13.46□□□□□ -0.25
PHGDH-218ENST00000641491 MYO16Q9Y6X6 1858 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 TCRBV5S1A1TA0A578 114 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 FAM86C2PA6NEL3 165 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 PSTPIP1O43586 416 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 TUBB4AP04350 444 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 CYBBP04839 570 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 COMTP21964 271 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 SP100P23497 879 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-218ENST00000641491 CORO1AP31146 461 aaKnown RBP13.45□□□□□ -0.26
PHGDH-218ENST00000641491 ARL4AP40617 200 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 IFNAR2P48551 515 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 RING1Q06587 406 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 PPP2R5DQ14738 602 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 COL19A1Q14993 1142 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 RPS6KA1Q15418 735 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 LEXMQ3ZCV2 418 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 BOLA3Q53S33 107 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 ZC3H12AQ5D1E8 599 aaKnown RBP13.45□□□□□ -0.26
PHGDH-218ENST00000641491 DNTTIP2Q5QJE6 756 aaKnown RBP13.45□□□□□ -0.26
PHGDH-218ENST00000641491 STXBP5Q5T5C0 1151 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 SEL1L2Q5TEA6 688 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 PTCRAQ6ISU1 281 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-218ENST00000641491 CHSY1Q86X52 802 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 KCTD6Q8NC69 237 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-218ENST00000641491 SH3RF2Q8TEC5 729 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 BTN2A3PQ96KV6 586 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 CYP2S1Q96SQ9 504 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 EPAS1Q99814 870 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 MAK16Q9BXY0 300 aaKnown RBP13.45□□□□□ -0.26
PHGDH-218ENST00000641491 SLC46A2Q9BY10 475 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 TKTL2Q9H0I9 626 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 POMKQ9H5K3 350 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 TBC1D14Q9P2M4 693 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 PATJQ8NI35 1801 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 REV3LO60673 3130 aa13.45□□□□□ -0.26
PHGDH-218ENST00000641491 CCDC66A2RUB6 948 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 GRID2IPA4D2P6 1211 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 PRR33A8MZF0 331 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 F5H5T6 163 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms