RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TRPV2Q9Y5S1 764 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 AFF1P51825 1210 aaKnown RBP17.65■□□□□ 0.42
PHGDH-211ENST00000641213 MAP3K7CLP57077 242 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SEPT7Q16181 437 aaKnown RBP17.65■□□□□ 0.42
PHGDH-211ENST00000641213 GNASQ5JWF2 1037 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SYPL2Q5VXT5 272 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 CYB5D1Q6P9G0 228 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SH2D5Q6ZV89 423 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 IFNL1Q8IU54 200 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SIX6OS1Q8N1H7 587 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 ZNF276Q8N554 614 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 TFB1MQ8WVM0 346 aaKnown RBP17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SIGLEC10Q96LC7 697 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SLC2A13Q96QE2 648 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 GAD1Q99259 594 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 NR2E3Q9Y5X4 410 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 DNAH12Q6ZR08 3092 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SYNJ2BP-COX16A0A087WUM0 186 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 HACD1B0YJ81 288 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 M0QYT0 321 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 TRDMT1O14717 391 aaKnown RBP17.65■□□□□ 0.42
PHGDH-211ENST00000641213 VAV1P15498 845 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 PRKCHP24723 683 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 TKTL1P51854 596 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 NCALDP61601 193 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SLC18A2Q05940 514 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SEMA5AQ13591 1074 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 NBPF20Q3BBV1 942 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 HFE2Q6ZVN8 426 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 SLC26A11Q86WA9 606 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 HTR3CQ8WXA8 447 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 WNT8BQ93098 351 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 THOC1Q96FV9 657 aaKnown RBP17.65■□□□□ 0.42
PHGDH-211ENST00000641213 LGMNQ99538 433 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 MTG1Q9BT17 334 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-211ENST00000641213 PRDM16Q9HAZ2 1276 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 KRT82Q9NSB4 513 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 MIOSQ9NXC5 875 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 COX16Q9P0S2 106 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 STAP1Q9ULZ2 295 aa17.65■□□□□ 0.42
PHGDH-211ENST00000641213 CXorf49A8MYA2 514 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-211ENST00000641213 MFSD11O43934 449 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 KPNA6O60684 536 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 FAM155BO75949 473 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 FAM200BP0CF97 657 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 CTGFP29279 349 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 ANKRD20A2Q5SQ80 823 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 ANKRD20A1Q5TYW2 823 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 ANKRD20A3Q5VUR7 823 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 GDF6Q6KF10 455 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-211ENST00000641213 UNC5AQ6ZN44 842 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 LRRC6Q86X45 466 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 SUGP1Q8IWZ8 645 aaKnown RBP17.64■□□□□ 0.41
PHGDH-211ENST00000641213 PPM1NQ8N819 430 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 ANKLE1Q8NAG6 615 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 RNF139Q8WU17 664 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 LPPQ93052 612 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 ECT2Q9H8V3 914 aa17.64■□□□□ 0.41
PHGDH-211ENST00000641213 NRP1O14786 923 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 LPXNO60711 386 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 APOEP02649 317 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 CHRNA1P02708 482 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 THP07101 528 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 GSTA2P09210 222 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 CTSHP09668 335 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 ALADP13716 330 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 CLCNKBP51801 687 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 NEK3P51956 506 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 RABGGTBP53611 331 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 CCDC15Q0P6D6 951 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 TTC39BQ5VTQ0 682 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-211ENST00000641213 CXCL17Q6UXB2 119 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 BZW1Q7L1Q6 419 aaKnown RBP17.63■□□□□ 0.41
PHGDH-211ENST00000641213 OTOAQ7RTW8 1153 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 CTAGE3PQ8IX95 158 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 MPP5Q8N3R9 675 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 APOPT1Q96IL0 206 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 EBNA1BP2Q99848 306 aaKnown RBP17.63■□□□□ 0.41
PHGDH-211ENST00000641213 SYT15Q9BQS2 421 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 VPS11Q9H270 941 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 SMYD2Q9NRG4 433 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 PIGVQ9NUD9 493 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 ZNF180Q9UJW8 692 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 A0A0A0MRY4 1105 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 WDR91A4D1P6 747 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 H3BRJ5 948 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 FYNP06241 537 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 PYGBP11216 843 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 GRIA1P42261 906 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 LHX1P48742 406 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 GJA9P57773 515 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 DEUP1Q05D60 604 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 NME3Q13232 169 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 DENND5BQ6ZUT9 1274 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 TMEM86AQ8N2M4 240 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 C3orf58Q8NDZ4 430 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 SPATA13Q96N96 652 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 SMOQ99835 787 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 ULBP1Q9BZM6 244 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 SENP6Q9GZR1 1112 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms