RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 FBXO15Q8NCQ5 510 aaPredicted RBP7.46□□□□□ -1.22
SCARB2-224ENST00000640880 ADAMTS18Q8TE60 1221 aa7.46□□□□□ -1.22
SCARB2-224ENST00000640880 WDR60Q8WVS4 1066 aa7.46□□□□□ -1.22
SCARB2-224ENST00000640880 KCNN1Q92952 543 aa7.46□□□□□ -1.22
SCARB2-224ENST00000640880 CENPOQ9BU64 300 aa7.46□□□□□ -1.22
SCARB2-224ENST00000640880 FSCN3Q9NQT6 498 aa7.46□□□□□ -1.22
SCARB2-224ENST00000640880 FAM53CQ9NYF3 392 aa7.46□□□□□ -1.22
SCARB2-224ENST00000640880 PI4KBQ9UBF8 816 aa7.46□□□□□ -1.22
SCARB2-224ENST00000640880 DNAJB11Q9UBS4 358 aa7.46□□□□□ -1.22
SCARB2-224ENST00000640880 DERAQ9Y315 318 aa7.46□□□□□ -1.22
SCARB2-224ENST00000640880 OVOS2A0A0G2JMS6 1433 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 PKD1L3Q7Z443 1732 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 F5H0A9 414 aaPredicted RBP7.45□□□□□ -1.22
SCARB2-224ENST00000640880 RTN3O95197 1032 aaPredicted RBP7.45□□□□□ -1.22
SCARB2-224ENST00000640880 CNPP09543 421 aaKnown RBP7.45□□□□□ -1.22
SCARB2-224ENST00000640880 GNAT2P19087 354 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 PI3P19957 117 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 SERPINA4P29622 427 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 NAP1L1P55209 391 aaKnown RBP7.45□□□□□ -1.22
SCARB2-224ENST00000640880 RAC3P60763 192 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 MYO1EQ12965 1108 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 EIF4A2Q14240 407 aaKnown RBP7.45□□□□□ -1.22
SCARB2-224ENST00000640880 SSPNQ14714 243 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 ANKRD1Q15327 319 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 ZSCAN23Q3MJ62 389 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 ATG16L1Q676U5 607 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 ACAD10Q6JQN1 1059 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 TTC30AQ86WT1 665 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 Q8N3U1 123 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 ABHD5Q8WTS1 349 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 CPT1BQ92523 772 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 MARS2Q96GW9 593 aaKnown RBP7.45□□□□□ -1.22
SCARB2-224ENST00000640880 C7orf26Q96N11 449 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 SERINC2Q96SA4 455 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 DPYSL5Q9BPU6 564 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 REEP2Q9BRK0 252 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 SMOC2Q9H3U7 446 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 RNPEPQ9H4A4 650 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 CXorf36Q9H7Y0 433 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 UNKLQ9H9P5 680 aaKnown RBP7.45□□□□□ -1.22
SCARB2-224ENST00000640880 NDUFAF4Q9P032 175 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 ORC3Q9UBD5 711 aaPredicted RBP7.45□□□□□ -1.22
SCARB2-224ENST00000640880 KCND3Q9UK17 655 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 CNTN6Q9UQ52 1028 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 CLCA2Q9UQC9 943 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 IL16Q14005 1332 aa7.45□□□□□ -1.22
SCARB2-224ENST00000640880 SBF2Q86WG5 1849 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 PGPEP1LA6NFU8 196 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 EFCAB8A8MWE9 144 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 IPO8O15397 1037 aaKnown RBP7.44□□□□□ -1.22
SCARB2-224ENST00000640880 CD3EAPO15446 510 aaKnown RBP7.44□□□□□ -1.22
SCARB2-224ENST00000640880 ZBED4O75132 1171 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 TAF5LO75529 589 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 LMNAP02545 664 aaKnown RBP7.44□□□□□ -1.22
SCARB2-224ENST00000640880 HGFP14210 728 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 RRM1P23921 792 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 MGAT1P26572 445 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 RABEP1Q15276 862 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 SMAD1Q15797 465 aaKnown RBP7.44□□□□□ -1.22
SCARB2-224ENST00000640880 HAUS3Q68CZ6 603 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 MFSD5Q6N075 450 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 TMEM108Q6UXF1 575 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 OR8H2Q8N162 312 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 TDRD7Q8NHU6 1098 aaKnown RBP7.44□□□□□ -1.22
SCARB2-224ENST00000640880 LRIG1Q96JA1 1093 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 ZNF668Q96K58 619 aaPredicted RBP7.44□□□□□ -1.22
SCARB2-224ENST00000640880 TRIM5Q9C035 493 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 ABHD16BQ9H3Z7 469 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 GBA2Q9HCG7 927 aaPredicted RBP7.44□□□□□ -1.22
SCARB2-224ENST00000640880 TBX20Q9UMR3 447 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 DNAJC16Q9Y2G8 782 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 PCDH11XQ9BZA7 1347 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 PCDH11YQ9BZA8 1340 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 PLEKHG2Q9H7P9 1386 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 DOT1LQ8TEK3 1739 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
SCARB2-224ENST00000640880 CCDC195A0A1B0GUA6 201 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 DHHO43323 396 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 B4GALT4O60513 344 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 RPP40O75818 363 aaKnown RBP7.43□□□□□ -1.22
SCARB2-224ENST00000640880 MBD3O95983 291 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 SPATA31D3P0C874 917 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 HK1P19367 917 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 GCSHP23434 173 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 YY1P25490 414 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 NTSR1P30989 418 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 RBM5P52756 815 aaKnown RBP eCLIP7.43□□□□□ -1.22
SCARB2-224ENST00000640880 CLNS1AP54105 237 aaKnown RBP7.43□□□□□ -1.22
SCARB2-224ENST00000640880 KIAA2012Q0VF49 1180 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 TSTQ16762 297 aaKnown RBP7.43□□□□□ -1.22
SCARB2-224ENST00000640880 GALNTL6Q49A17 601 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 DRICH1Q6PGQ1 229 aaPredicted RBP7.43□□□□□ -1.22
SCARB2-224ENST00000640880 SPATA31D4Q6ZUB0 917 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 POC1BQ8TC44 478 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 TMEM176AQ96HP8 235 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 NUDT16L1Q9BRJ7 211 aaKnown RBP7.43□□□□□ -1.22
SCARB2-224ENST00000640880 SDF4Q9BRK5 362 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 VSX1Q9NZR4 365 aaPredicted RBP7.43□□□□□ -1.22
SCARB2-224ENST00000640880 VPS51Q9UID3 782 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 OAZ3Q9UMX2 235 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms