RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 GRAMD1AQ96CP6 724 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 OLFM3Q96PB7 478 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 SLC2A13Q96QE2 648 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 ARHGAP39Q9C0H5 1083 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 PNPLA8Q9NP80 782 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 SCN10AQ9Y5Y9 1956 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 IQANK1A0A1B0GTG1 560 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 MYBPHLA2RUH7 354 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 CASTOR2A6NHX0 329 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 NRP1O14786 923 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 AP1G2O75843 785 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 DGKIO75912 1065 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 FAM133BQ5BKY9 247 aaKnown RBP22.25■■□□□ 1.15
CLN6-224ENST00000638076 RNF139Q8WU17 664 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 HTR3CQ8WXA8 447 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 PCED1BQ96HM7 432 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 AGO3Q9H9G7 860 aaKnown RBP22.25■■□□□ 1.15
CLN6-224ENST00000638076 SPC25Q9HBM1 224 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 SLC12A4Q9UP95 1085 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 TTLL3Q9Y4R7 772 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 MFSD11O43934 449 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 VAV1P15498 845 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 DEUP1Q05D60 604 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 MFSD14CQ5VZR4 134 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 RGS9BPQ6ZS82 235 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 FAM35AQ86V20 835 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 KCNK16Q96T55 309 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 LGMNQ99538 433 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 SMOQ99835 787 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 PAAF1Q9BRP4 392 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 ULBP1Q9BZM6 244 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 GABRQQ9UN88 632 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 GIT1Q9Y2X7 761 aa22.25■■□□□ 1.15
CLN6-224ENST00000638076 CREB3O43889 395 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 TPSB2P20231 275 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 TPSAB1Q15661 275 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 ZNF534Q76KX8 674 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 BZW1Q7L1Q6 419 aaKnown RBP22.24■■□□□ 1.15
CLN6-224ENST00000638076 BANPQ8N9N5 519 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 NETO2Q8NC67 525 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 TCP10LQ8TDR4 215 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 LRRC8CQ8TDW0 803 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 ALKBH8Q96BT7 664 aaKnown RBP22.24■■□□□ 1.15
CLN6-224ENST00000638076 PIGVQ9NUD9 493 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.24■■□□□ 1.154e-7■■■■■ 28.5
CLN6-224ENST00000638076 PHTF1Q9UMS5 762 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 HACD1B0YJ81 288 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 GPR182O15218 404 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 MT-ND3P03897 115 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 GSTA1P08263 222 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 SLC20A2Q08357 652 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 MGAT3Q09327 533 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 FAAP100Q0VG06 881 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 SEPT7Q16181 437 aaKnown RBP22.24■■□□□ 1.15
CLN6-224ENST00000638076 GPRIN1Q7Z2K8 1008 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 PLAC1Q9HBJ0 212 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 SLCO1B3Q9NPD5 702 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 KLHL14Q9P2G3 628 aa22.24■■□□□ 1.15
CLN6-224ENST00000638076 YJEFN3A6XGL0 299 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 E7ENQ6 273 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 H3BRJ5 948 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 CAPN9O14815 690 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 C1QAP02745 245 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 FYNP06241 537 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 ADRA1DP25100 572 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 MAGEA3P43357 314 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 CACNA2D1P54289 1103 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 DENND5BQ6ZUT9 1274 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 CTAGE3PQ8IX95 158 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 CCDC63Q8NA47 563 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 RNF169Q8NCN4 708 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 ZMIZ2Q8NF64 920 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 SLC7A14Q8TBB6 771 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 LRRC39Q96DD0 335 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 PLCD4Q9BRC7 762 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 UPF3AQ9H1J1 476 aaKnown RBP22.23■■□□□ 1.15
CLN6-224ENST00000638076 TMEM30AQ9NV96 361 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 DNAJC8O75937 253 aaPredicted RBP22.23■■□□□ 1.15
CLN6-224ENST00000638076 UBOX5O94941 541 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 FBXO21O94952 628 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 IBSPP21815 317 aaPredicted RBP22.23■■□□□ 1.15
CLN6-224ENST00000638076 DAOAP59103 153 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 ANKRD20A2Q5SQ80 823 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 ANKRD20A1Q5TYW2 823 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 ANKRD20A3Q5VUR7 823 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 PPM1NQ8N819 430 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 ADAM32Q8TC27 787 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 SERAC1Q96JX3 654 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 RMDN2Q96LZ7 410 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 C12orf65Q9H3J6 166 aaKnown RBP22.23■■□□□ 1.15
CLN6-224ENST00000638076 SLC40A1Q9NP59 571 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 STARD13Q9Y3M8 1113 aa22.23■■□□□ 1.15
CLN6-224ENST00000638076 FAM155AB1AL88 458 aaPredicted RBP22.22■■□□□ 1.15
CLN6-224ENST00000638076 TM9SF1O15321 606 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 MYCNP04198 464 aaPredicted RBP22.22■■□□□ 1.15
CLN6-224ENST00000638076 THPOP40225 353 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 GRIA1P42261 906 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 SREBF2Q12772 1141 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 TRIM32Q13049 653 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 SEMA5AQ13591 1074 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms