RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ST7Q9NRC1 585 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 ABCC13Q9NSE7 274 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 OLA1Q9NTK5 396 aaKnown RBP18.51■□□□□ 0.55
PNKP-230ENST00000638016 CACNA2D2Q9NY47 1150 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 APEX2Q9UBZ4 518 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 FBXO10Q9UK96 956 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.5■□□□□ 0.55
PNKP-230ENST00000638016 GOLGA6L7A0A1B0GV03 622 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 A0A1W2PQF6 199 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 FAM170AA1A519 330 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 LTFP02788 710 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 HOXB2P14652 356 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 GABRG2P18507 467 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 LMNB2Q03252 620 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 CSRP2Q16527 193 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 HSF5Q4G112 596 aaPredicted RBP18.5■□□□□ 0.55
PNKP-230ENST00000638016 MSANTD2Q6P1R3 559 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 FAM217AQ8IXS0 508 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 CHPFQ8IZ52 775 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 CPXM2Q8N436 756 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 GPR161Q8N6U8 529 aaKnown RBP18.5■□□□□ 0.55
PNKP-230ENST00000638016 OLIG1Q8TAK6 271 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 ADAM32Q8TC27 787 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 ZNF606Q8WXB4 792 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 HSFY1Q96LI6 401 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 THAP9Q9H5L6 903 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 CD248Q9HCU0 757 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 SAMSN1Q9NSI8 373 aaKnown RBP18.5■□□□□ 0.55
PNKP-230ENST00000638016 BCCIPQ9P287 314 aaKnown RBP eCLIP18.5■□□□□ 0.55
PNKP-230ENST00000638016 NAALADL1Q9UQQ1 740 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 ZNF510Q9Y2H8 683 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 STARD13Q9Y3M8 1113 aa18.5■□□□□ 0.55
PNKP-230ENST00000638016 HBS1LQ9Y450 684 aaKnown RBP18.5■□□□□ 0.55
PNKP-230ENST00000638016 E5RJQ4 531 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 HOXD9P28356 352 aaPredicted RBP18.49■□□□□ 0.55
PNKP-230ENST00000638016 NTSR1P30989 418 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 CHKAP35790 457 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 MPLP40238 635 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 ATXN1P54253 815 aaKnown RBP18.49■□□□□ 0.55
PNKP-230ENST00000638016 MAN2A1Q16706 1144 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 USP39Q53GS9 565 aaKnown RBP18.49■□□□□ 0.55
PNKP-230ENST00000638016 PMS2CLQ68D20 193 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 DPY19L2P1Q6NXN4 242 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 PASD1Q8IV76 773 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 PGBD3Q8N328 593 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 DDI1Q8WTU0 396 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 SORCS1Q8WY21 1168 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 IRGQQ8WZA9 623 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 SHC3Q92529 594 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 MYEOVQ96EZ4 313 aa18.49■□□□□ 0.55
PNKP-230ENST00000638016 POLMQ9NP87 494 aaPredicted RBP18.49■□□□□ 0.55
PNKP-230ENST00000638016 MBD1Q9UIS9 605 aaPredicted RBP18.49■□□□□ 0.55
PNKP-230ENST00000638016 MED19A0JLT2 244 aaPredicted RBP18.48■□□□□ 0.55
PNKP-230ENST00000638016 GFRA2O00451 464 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 PAPSS1O43252 624 aaPredicted RBP18.48■□□□□ 0.55
PNKP-230ENST00000638016 LRP3O75074 770 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 ALDH1A2O94788 518 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 IGLV3-27P01718 113 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 PRKCSHP14314 528 aaPredicted RBP18.48■□□□□ 0.55
PNKP-230ENST00000638016 P2RY2P41231 377 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 RPL34P49207 117 aaKnown RBP18.48■□□□□ 0.55
PNKP-230ENST00000638016 HARS2P49590 506 aaKnown RBP18.48■□□□□ 0.55
PNKP-230ENST00000638016 PITX1P78337 314 aaPredicted RBP18.48■□□□□ 0.55
PNKP-230ENST00000638016 CREB5Q02930 508 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 PUM1Q14671 1186 aaKnown RBP eCLIP18.48■□□□□ 0.55
PNKP-230ENST00000638016 PREPLQ4J6C6 727 aaPredicted RBP18.48■□□□□ 0.55
PNKP-230ENST00000638016 SYPL2Q5VXT5 272 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 TMEM215Q68D42 235 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 RFWD3Q6PCD5 774 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 ARMCX6Q7L4S7 300 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 DGLUCYQ7Z3D6 616 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 DQX1Q8TE96 717 aaKnown RBP18.48■□□□□ 0.55
PNKP-230ENST00000638016 FAM149B1Q96BN6 582 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 LOXL4Q96JB6 756 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 SLC4A5Q9BY07 1137 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 CALCOCO1Q9P1Z2 691 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 DNAJC12Q9UKB3 198 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 CDV3Q9UKY7 258 aaKnown RBP18.48■□□□□ 0.55
PNKP-230ENST00000638016 PLXND1Q9Y4D7 1925 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 NCOR2Q9Y618 2525 aa18.48■□□□□ 0.55
PNKP-230ENST00000638016 TNRC6BQ9UPQ9 1833 aaKnown RBP18.47■□□□□ 0.55
PNKP-230ENST00000638016 DCDC2BA2VCK2 349 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 GTPBP10A4D1E9 387 aaKnown RBP18.47■□□□□ 0.55
PNKP-230ENST00000638016 NCAM1P13591 858 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 ERCC5P28715 1186 aaPredicted RBP18.47■□□□□ 0.55
PNKP-230ENST00000638016 SLC6A4P31645 630 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 KCNMA1Q12791 1236 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 TAF5Q15542 800 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 ELF2Q15723 593 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 MAP7D1Q3KQU3 841 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 VWA3BQ502W6 1294 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 PLA2G2CQ5R387 149 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 NADSYN1Q6IA69 706 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 ENOSF1Q7L5Y1 443 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 TAC4Q86UU9 113 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 WDTC1Q8N5D0 677 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 DEFB119Q8N690 84 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 WFDC5Q8TCV5 224 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 IPO4Q8TEX9 1081 aaKnown RBP18.47■□□□□ 0.55
PNKP-230ENST00000638016 FCRL2Q96LA5 508 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms