RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 ZSCAN18Q8TBC5 510 aaPredicted RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 UBDO15205 165 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 TNFAIP8O95379 198 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 PGM3O95394 542 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 PCSK1P29120 753 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 HOXA10P31260 410 aaPredicted RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 TRPC1P48995 793 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 UBAP2LQ14157 1087 aaKnown RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 NET1Q7Z628 596 aaPredicted RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 FAR2Q96K12 515 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 FAM8A1Q9UBU6 413 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 TPP1O14773 563 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 CHADO15335 359 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 CSPG5O95196 566 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 SLC25A27O95847 323 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 ERVK-10P10266 1014 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 POU6F1Q14863 301 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 ACAP1Q15027 740 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 UGCGQ16739 394 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 LY6KQ17RY6 165 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 NBPF12Q5TAG4 269 aaPredicted RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 FBXO16Q8IX29 292 aaPredicted RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 PHF21BQ96EK2 531 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 GLIS2Q9BZE0 524 aaPredicted RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 BCAS3Q9H6U6 928 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 SIX2Q9NPC8 291 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 AAR2Q9Y312 384 aaKnown RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 NFAT5O94916 1531 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 MYO1GB0I1T2 1018 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 PGAM1P18669 254 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 PNPLA4P41247 253 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 NUMBP49757 651 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 METTL7BQ6UX53 244 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 CYP2R1Q6VVX0 501 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 UBE2OQ9C0C9 1292 aaKnown RBP16.29■□□□□ 0.2
CLN5-218ENST00000637397 NR5A2O00482 541 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 PPIDQ08752 370 aaKnown RBP16.29■□□□□ 0.2
CLN5-218ENST00000637397 CCDC126Q96EE4 140 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 SIKE1Q9BRV8 207 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 GRIP2Q9C0E4 1043 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 CAMTA1Q9Y6Y1 1673 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 NKRFO15226 690 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLN5-218ENST00000637397 GSC2O15499 205 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 AHCYL1O43865 530 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 DDHD2O94830 711 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 CPB1P15086 417 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 LAMC2Q13753 1193 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 GRTP1Q5TC63 336 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 ZDHHC24Q6UX98 284 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 ASIC4Q96FT7 647 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 PORCNQ9H237 461 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 GPAMQ9HCL2 828 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 CLIC5Q9NZA1 410 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 HEATR9A2RTY3 570 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 C2orf71A6NGG8 1288 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 RHOBTB1O94844 696 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 GPR162Q16538 588 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 KCNMB4Q86W47 210 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 ECSITQ9BQ95 431 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 DCUN1D5Q9BTE7 237 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 LATS2Q9NRM7 1088 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 DDX28Q9NUL7 540 aaKnown RBP16.29■□□□□ 0.2
CLN5-218ENST00000637397 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
CLN5-218ENST00000637397 C5orf60A6NFR6 353 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 M0R2N6 131 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 GEMP55040 296 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 ROR2Q01974 943 aaKnown RBP16.28■□□□□ 0.2
CLN5-218ENST00000637397 BST2Q10589 180 aaKnown RBP16.28■□□□□ 0.2
CLN5-218ENST00000637397 PLD3Q8IV08 490 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 PHACTR1Q9C0D0 580 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 NMRAL1Q9HBL8 299 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 RPL26L1Q9UNX3 145 aaKnown RBP16.28■□□□□ 0.2
CLN5-218ENST00000637397 LACTBL1A8MY62 500 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 ACKR2O00590 384 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 USP1O94782 785 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 VSIG10LQ86VR7 867 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 ULK2Q8IYT8 1036 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 BLOC1S5Q8TDH9 187 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 CELF6Q96J87 481 aaKnown RBP16.28■□□□□ 0.2
CLN5-218ENST00000637397 C17orf80Q9BSJ5 609 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 NMUR2Q9GZQ4 415 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 DENND2DQ9H6A0 471 aaPredicted RBP16.28■□□□□ 0.2
CLN5-218ENST00000637397 ZDHHC18Q9NUE0 388 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 WFS1O76024 890 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 UPP2O95045 317 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 PYGLP06737 847 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 CNTN2Q02246 1040 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 SGO1Q5FBB7 561 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 SZRD1Q7Z422 152 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 C12orf56Q8IXR9 622 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 PIK3R5Q8WYR1 880 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 PPP1R2P1Q96PQ5 205 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 MAN1C1Q9NR34 630 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 AFDNP55196 1824 aaKnown RBP16.28■□□□□ 0.2
CLN5-218ENST00000637397 ESRRBO95718 433 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 APOA1P02647 267 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 ATP5BP06576 529 aaKnown RBP16.28■□□□□ 0.2
CLN5-218ENST00000637397 CHRM3P20309 590 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 NCKAP1LP55160 1127 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 DCAF4L1Q3SXM0 396 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms